Pairwise Alignments

Query, 589 a.a., type VI secretion system baseplate subunit TssF from Vibrio cholerae E7946 ATCC 55056

Subject, 623 a.a., type VI secretion protein, VC_A0110 family from Enterobacter asburiae PDN3

 Score =  248 bits (634), Expect = 4e-70
 Identities = 200/629 (31%), Positives = 304/629 (48%), Gaps = 56/629 (8%)

Query: 5   KYFREELAFLKEQGKEFTEIHPQLSRFLHGR---TTDPDVERLLEGFAFLTARLREKVED 61
           +Y+  ELA+L+E G EF E +P+++  L  R     DP  ERL+EGFAFLT+R++ K++ 
Sbjct: 7   EYYNRELAYLREMGAEFAERYPKVAGRLGMRGIEVADPYTERLMEGFAFLTSRVQMKMDA 66

Query: 62  EFPELTHSIINMLWPNYLRPIPSMSVVAFEPDKS---VSEKQVIPRNTQLDSKPV--FGT 116
           EFP  +  ++ M+ PNYL P PSM++   EPD S   +S+  ++PR T +DS  +   G 
Sbjct: 67  EFPRFSQRLLEMIAPNYLAPTPSMAIAEIEPDSSRGDLSKGFIVPRGTMMDSLALKKTGV 126

Query: 117 ACHFNTCRDVALYPMQCQ-----GVHAE---------HTREATTIQISLRMLGDMTVGDA 162
            C + T  +V L P++       GV A+              + ++I +   G   +G  
Sbjct: 127 TCSYTTAHEVNLLPLKIDKVELGGVPADLPLAQLGLSQRGIGSALRIRIACDGPQNLGHL 186

Query: 163 KLDTVRFYLGG-DKYSSQTLYLWLHHY--LQKMTIEVQGVEFALPADAFSTVGFSSDQAL 219
             D + F+LGG D  + + L L + H+  +   T+  Q     L +DA    GF  DQAL
Sbjct: 187 DFDRLEFFLGGPDIEALKLLELVMEHHAGIVCQTVSPQPQRQLLASDALRQEGFEPDQAL 246

Query: 220 LPYPKNVYDGYRILQEYLSFPEAFHFFDVKGFAKALPKAVSGD--FTLRIHFSKTLPADT 277
           LP     +DGYR+LQEY +FP  F F  + G +  + +   G+  F + I   K+     
Sbjct: 247 LPDDLRNFDGYRLLQEYFAFPARFRFISLSGLSTLIERC-EGEKAFDIFILLDKSDEQLE 305

Query: 278 R-VRQDNFQLYCTPVINLFEHDADPIDLTGRRSEYRIVPSSRYPAHYEIFSVDQVVGWQD 336
           R V   +  L+CTPVINLF   A    L   + EY +V  +  P  YEI++V ++ G  D
Sbjct: 306 RVVDASHLALHCTPVINLFPKVAARQKLNEGQHEYHLVVDNIRPLDYEIYAVKKIYGSAD 365

Query: 337 TQSEGKRIR-------GEKRIYSSFESFQHEVERVRHRQALYYRTRVKESIRGDGFDSFI 389
            Q + +  R       G+   Y ++ S + E +RV    AL Y TR        G + F+
Sbjct: 366 GQRDDQTFRPFWSTWSGDAGNYGAYFSLRRE-QRVLSEHALRYGTRTGYI----GSEVFV 420

Query: 390 SFVRGDETLSMGVDEAVSIKLTCTNRLLPLEL--GVGDICVATDSSPPFATFKNITV--- 444
           S V             +S ++ CT+R LPL L   +G   +A DS P     K++T+   
Sbjct: 421 SLVDEQHAPWQENLRYISAEVLCTSRDLPLMLQQELGQFIMA-DSMP----VKSLTLRKG 475

Query: 445 PSQSLRPVLDGSLLWTLISNLSLNYLSLLSKDALSCVLRAYDFRALVDRQAERVARMRLD 504
           P+     + +G   W LIS L +NYLSL+  +             L    AE     +++
Sbjct: 476 PTPPRPALAEGFSTWRLISQLQMNYLSLMDSENEDGAAALRQLLGLYANLAETPVARQVE 535

Query: 505 GIVKIESKPVD-KILRGLPV---RGLQSTLYVDQAGFGSEGDLFLFGTVLSHFFALYASI 560
           G+     +PV  ++    PV   RG+  TL VD+  F S    +LFG+V+   FA   SI
Sbjct: 536 GVRHCVLEPVHRRVPEPGPVVFARGIGITLTVDERAF-SGASPWLFGSVMERLFARLVSI 594

Query: 561 NSFHELVVVNISNQEKYSWGTQSGMQPLI 589
           NSF E  + +    E   W  + G + LI
Sbjct: 595 NSFTEFTLKSQQRGEIGYWAPRMGKRALI 623