Pairwise Alignments

Query, 589 a.a., type VI secretion system baseplate subunit TssF from Vibrio cholerae E7946 ATCC 55056

Subject, 584 a.a., type VI secretion protein, VC_A0110 family from Enterobacter asburiae PDN3

 Score =  267 bits (683), Expect = 8e-76
 Identities = 183/595 (30%), Positives = 294/595 (49%), Gaps = 47/595 (7%)

Query: 5   KYFREELAFLKEQGKEFTEIHPQLSRFLH---GRTTDPDVERLLEGFAFLTARLREKVED 61
           +Y+  E+ +L E G+EF   HP+ +  L+       DP VERL EGFAFL  RLREK++D
Sbjct: 7   RYYDAEMRYLLEAGEEFARAHPEQAAMLNLDKAGARDPYVERLFEGFAFLMGRLREKLDD 66

Query: 62  EFPELTHSIINMLWPNYLRPIPSMSVVAFEPD-KSVSEKQVIPRNTQLDSKPV--FGTAC 118
           + PELT  ++++LWP+YLR IPSMSVV F PD + + E+  I +  +++S+P+   GT C
Sbjct: 67  DLPELTEGLVSLLWPHYLRTIPSMSVVEFTPDWREMKEQMRIVKGFEINSRPIGEKGTRC 126

Query: 119 HFNTCRDVALYPMQCQGVHAEHTREATTIQ----ISLRM----LGDMTVGDAKLDTVRFY 170
            + T +++ L P+       EH R +T +     ISLR     L D +  D  L  + FY
Sbjct: 127 RYTTTKEITLQPLS-----LEHARLSTDLDGRSVISLRFNCSHLADWSRVD--LRQIPFY 179

Query: 171 LGGDKYSSQTLYLWLHHYLQKMTIEVQGVEFALPADA-FSTVGFSSDQALLPYPKNVYDG 229
              D   +  ++        ++ + + G     P D  F+ +GF  D  L P   + + G
Sbjct: 180 FNADAPLACAMHEAFTMNTARLWMRMPGDMDRRPLDGYFAALGFGDDDDLWPKGNSSFSG 239

Query: 230 YRILQEYLSFPEAFHFFDVKGFAKALPKAVSGDFTLRIHFSKTLPADTRVRQDNFQLYCT 289
           Y++L EY +F E F F  ++G       A    F + +  ++    D    + + +L C 
Sbjct: 240 YQLLLEYFTFREKFMFTGLRGLESVNFPAELPWFEIDVVLAERWEHDFSFTEKHLRLNCV 299

Query: 290 PVINLFEHDADPIDLTGRRSEYRIVPSSRYPAHYEIFSVDQVVGWQDTQSEGKRIRGEKR 349
           PVINLF  ++DP+ L   ++EY + P      H EI++VD V+               + 
Sbjct: 300 PVINLFPLESDPLTLNSLQTEYMLRPMRVQDGHTEIYAVDSVMS------------SSQH 347

Query: 350 IYSSFESFQHEVERVRHR-QALYYRTRVKESIRGDGFDSFISFVRGDETLSMGVDEAVSI 408
            Y  F SF+H+   +RH     YY TRV+    G      I      +  ++  DE++S+
Sbjct: 348 TYVPFSSFRHKGGMMRHEAPEYYYHTRVRRGPSGLHNTWLILGGEAFDNHTVPEDESLSL 407

Query: 409 KLTCTNRLLP---LELGVGDICVATDSSPPFATFKNITVPSQSLRPVLDGSLLWTLISNL 465
            LT TN  LP   L+  V D  + T ++      +N+  P+    P       W ++S+L
Sbjct: 408 TLTGTNGQLPRRALQSTVLDTVMKTTAAS--IAVRNLCAPTLPCYPPAQDRFHWRVLSHL 465

Query: 466 SLNYLSLL-SKDALSCVLRAYDFRALVDRQAERVARMRLDGIVKIESKPVDKILRGLPVR 524
              +LS++ + D L   L  Y++          + R RL+ I+ ++    ++  +G  VR
Sbjct: 466 GSGFLSMMDNADVLRGTLALYEW------TNSEMNRRRLEAIIDVKHSETERFEQGYLVR 519

Query: 525 GLQSTLYVDQAGFGSEGDLFLFGTVLSHFFALYASINSFHELVVVNISNQEKYSW 579
           G+Q  + +D  GF   GD+ LFG +LS FFALY  I  F+ L+++     E+  W
Sbjct: 520 GVQIEVTLDSHGFAGRGDICLFGEMLSRFFALYTDIYLFNRLIIILQPTGERLEW 574