Pairwise Alignments

Query, 589 a.a., type VI secretion system baseplate subunit TssF from Vibrio cholerae E7946 ATCC 55056

Subject, 225 a.a., Type VI secretion protein, family from Escherichia coli ECRC62

 Score =  146 bits (368), Expect = 1e-39
 Identities = 77/188 (40%), Positives = 106/188 (56%), Gaps = 16/188 (8%)

Query: 3   QDKYFREELAFLKEQGKEFTEIHPQLSRFLHGRTTDPDVERLLEGFAFLTARLREKVEDE 62
           +++YFREEL +L++  K      P L+RFL  +  DPD+ERLLEG AFLT  LR+K+EDE
Sbjct: 4   EERYFREELDYLRQLSKLLATEKPHLARFLAEKDADPDIERLLEGVAFLTGNLRQKIEDE 63

Query: 63  FPELTHSIINMLWPNYLRPIPSMSVVAFEPDKSVSEKQV-IPRNTQL------------- 108
           FPELTH +I MLWPNYLRP+P+M+++ + PD   S   V IPRN Q              
Sbjct: 64  FPELTHGLIKMLWPNYLRPVPAMTLIEYTPDMDKSSVPVLIPRNEQFTTNAGEIRVDEVL 123

Query: 109 --DSKPVFGTACHFNTCRDVALYPMQCQGVHAEHTREATTIQISLRMLGDMTVGDAKLDT 166
             D+K      C F  CRD+ L P++ + +    T     I I+  +          L+ 
Sbjct: 124 PSDAKKEEPPPCTFTLCRDIWLLPVRLEQIENRSTTRNGVINITFSVAPGTDFRTLDLNK 183

Query: 167 VRFYLGGD 174
           +RF+LG D
Sbjct: 184 LRFWLGND 191