Pairwise Alignments

Query, 589 a.a., type VI secretion system baseplate subunit TssF from Vibrio cholerae E7946 ATCC 55056

Subject, 602 a.a., hypothetical protein from Acinetobacter radioresistens SK82

 Score =  187 bits (476), Expect = 8e-52
 Identities = 151/617 (24%), Positives = 296/617 (47%), Gaps = 55/617 (8%)

Query: 6   YFREELAFLKEQGKEFTEIHPQLSRFL---HGRTTDPDVERLLEGFAFLTARLREKVEDE 62
           Y+ ++L    +Q +EF + +P++++ L     +  DP +ERL++ F+ + AR+ +K+ED 
Sbjct: 8   YYEKQLQEFSQQSREFAQKYPKIAQRLSLNQEQIDDPHIERLIQAFSLIAARIDKKLEDS 67

Query: 63  FPELTHSIINMLWPNYLRPIPSMSVVAFEPDKSVSE---KQVIPRNTQLDSKPVFGTACH 119
           +   T ++  +++P YLR  P+ ++V+FE +  + +   + +IP+ T L S+   G  C 
Sbjct: 68  YDVFTRALFEVMFPQYLRHFPACTIVSFEDENKIRQLTGRHIIPKQTTLKSRSFRGVQCE 127

Query: 120 FNTCRDVALYPMQCQGVHAE-----HTREATTIQISLRMLGDMTVGDAKLDTVRFYLGGD 174
           FNT + V L P+    +  +     H   +    +SL+         A L   R  +  D
Sbjct: 128 FNTSQQVILLPVALSQLEFKTSPTAHIHLSQNASLSLKF-DIFNNAQAVLIQERLPIYLD 186

Query: 175 KYSSQTLYLWLHHYLQKMTIEVQGVEFALPAD-AFSTVGFSSDQALLPYPKNVYDGYRIL 233
             S+  L +    +  +    ++  +  L  D  FS +GF+ ++ LLP  ++ +  YR+L
Sbjct: 187 AISNFPLQVLDSIFRPETGFALRIGQQILKIDNPFSIIGFAEEECLLPVDQHTHHAYRLL 246

Query: 234 QEYLSFPEAFHFFDVK-GFAKALPKAVSGDFTLRIHFSKTLPADTRVRQ------DNFQL 286
            EY  FPE F++ ++  G  K   +     F + I+F   L   + +R        NF+L
Sbjct: 247 MEYFCFPEKFNYLNLDLGILKGRIQQYE-SFEVLIYFKLNLNDQSMIRNYSELNVANFKL 305

Query: 287 YCTPVINLFEHDADPIDLTGRRSEYRIVPSSRYPAHYEIFSVDQVVGWQDTQSEGKRIRG 346
           + +P INLFE  A+P  +T  +  Y ++  + +P  Y+++S+ ++       +  +    
Sbjct: 306 FTSPAINLFEKQAEPQKITHTQLYYPLITDTHHPESYQVYSILEM-------NMVREKTN 358

Query: 347 EKRIYSSFESFQHEVERVRHRQALYYRTRVKESIRGDGFDSFISFVRGDETLSMGVDEAV 406
           ++++Y+S   F   +   ++ Q  ++     + I+ +  +   S +           + +
Sbjct: 359 QEQVYTSVLPF-FAISHYKNEQVQFFYALDYQPIQTNFVEMRYSIISKHLKPFEIKSDFI 417

Query: 407 SIKLTCTNRLLPLELGVGDICVATDSSPPFATFKNITVPSQSL---RPVLDGSL------ 457
           SI+L C+NR L  E        A   S       + ++  ++L   RP +  S       
Sbjct: 418 SIRLLCSNRDLAHE--------ALSQSNNILNLNDSSLARRALILKRPTVPYSFDQNKTE 469

Query: 458 LWTLISNLSLNYLSLLSKDALSCVLRAYDFRALVDRQAERVARMRLDGIVKIESKPVDKI 517
            W +IS+LSLN L+L+  D+LS V    +  AL +  + +   + ++ I ++E     K+
Sbjct: 470 QWRIISHLSLNTLALMKGDSLSHV---KELLALYNLPSSKENHLIINAIDQLEFSLTHKL 526

Query: 518 LRGLP----VRGLQSTLYVDQAGFGSEGDLFLFGTVLSHFFALYASINSFHELVVV-NIS 572
           +   P    +RG+++ L ++ + F     L++F  +LSH F L   INSF ++V+  ++S
Sbjct: 527 VDAKPFPMFIRGVKAELSINSSVFKGH-SLYIFSYLLSHIFNLKVQINSFVDVVITDSLS 585

Query: 573 NQEKYSWGTQSGMQPLI 589
            QE Y      G + L+
Sbjct: 586 QQELYQCVQNVGGKTLL 602