Pairwise Alignments

Query, 145 a.a., type VI secretion system baseplate subunit TssE from Vibrio cholerae E7946 ATCC 55056

Subject, 135 a.a., hypothetical protein from Pseudomonas sp. DMC3

 Score = 62.0 bits (149), Expect = 3e-15
 Identities = 43/130 (33%), Positives = 65/130 (50%), Gaps = 4/130 (3%)

Query: 16  FERLEANAKPMSLTRGPDAWD-VLESIKRNVSNILNTRIGGAQSAPHLGLVDFNDATLET 74
           FERL  +A+   L +G       + S+  +++ +L+TR G  Q+    GL D ND  L  
Sbjct: 8   FERLNGDAQ---LRKGNSLEACAMASVAAHLAKMLSTRAGSVQTLADYGLPDLNDMRLSL 64

Query: 75  LDLSVRIKLAIQQCLERYEPRLTRVLVRADQDSFNPLTLRFHITATINSEALHEKVQFSL 134
            D   + +LAI+  +E YEPRL+ V V +     + L L F I   +  E    +V FS 
Sbjct: 65  HDSLSQARLAIENFIEAYEPRLSNVRVISLPRDHDQLRLAFSIEGLLEVEGFKRQVSFSA 124

Query: 135 LLDQSRKYRV 144
            LD S + +V
Sbjct: 125 RLDGSGQVKV 134