Pairwise Alignments

Query, 492 a.a., type VI secretion system contractile sheath large subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 498 a.a., EvpB family type VI secretion protein from Pseudomonas simiae WCS417

 Score =  356 bits (914), Expect = e-103
 Identities = 179/433 (41%), Positives = 268/433 (61%), Gaps = 9/433 (2%)

Query: 65  VDQMLVELDKKISAQMDEILHNSQFQAMESAWRGLKLFVDRTDFRENNKVEILHVTKDEL 124
           ++ ++  +D K++AQ+++I+H+  FQ +ESAWRGL   V+ T+  E  K+ +L+++K +L
Sbjct: 67  IESIIAAIDAKLTAQVNQIIHHQDFQQLESAWRGLHYLVNNTESDEQLKIRVLNISKPDL 126

Query: 125 LEDFEFAPETA--QSGLYKHVYSAGYGQFGGEPVGAIIGNYAFTPSTPDMKLLQYMGALG 182
            +  +    TA  QS ++K +Y   YGQFGGEP G ++G+Y F  S PD++LL  +  + 
Sbjct: 127 HKTLKKFKGTAWDQSPIFKKMYEEEYGQFGGEPYGCLVGDYYFDQSPPDVELLGELSKVC 186

Query: 183 AMAHAPFISSVGPEFFGIDSFEELPNIKDLKSTFESPKYTKWRSLRESEDARYLGLTAPR 242
           A  H+PFI++  P   G+ S++EL N +DL   F +P+Y  WRSLRESED+RY+GLT PR
Sbjct: 187 AAMHSPFIAAASPTVMGMGSWQELSNPRDLTKIFTTPEYAGWRSLRESEDSRYIGLTMPR 246

Query: 243 FLLRVPYDPIENPVKSFNYAENV-SASHEHYLWGNTAFAFATRLTDSFAKYRWCPNIIGP 301
           FL R+PY    +PV++F + EN   A    Y W N A+A A  +  SF  Y WC  I G 
Sbjct: 247 FLARLPYGAKTDPVEAFAFEENTDGADSSKYTWANAAYAMAVNINRSFKHYGWCSRIRGI 306

Query: 302 QSGGAVEDLPVHVFES-MGALQSKIPTEVLITDRKEFELAEEGFIALTMRKGSDNAAFFS 360
           +SGG VE+LP H F +  G +  K PTE+ I+DR+E ELA+ GF+ L  +K +D AAF  
Sbjct: 307 ESGGEVENLPAHTFPTDDGGVDMKCPTEIAISDRREAELAKNGFMPLLHKKNTDFAAFIG 366

Query: 361 ANSIQKPKVFPNTKEGKEAETNYKLGTQLPYMMIINRLAHYVKVLQREQIGAWKERQDLE 420
           A S+QKP  +    +  +A  N  L  +LPY+    R AHY+K + R++IG++KE+ +++
Sbjct: 367 AQSLQKPAEY----DDPDATANANLAARLPYLFATCRFAHYLKCIVRDKIGSFKEKDEMQ 422

Query: 421 RELNSWIKQYV-ADQENPPADVRSRRPLRAARIEVMDVEGNPGWYQVSLSVRPHFKYMGA 479
           R L  WI  YV  D  +     +++ PL AA + V +VEGNPG+Y     +RPH++  G 
Sbjct: 423 RWLQDWILNYVDGDPAHSTETTKAQHPLAAAEVIVEEVEGNPGYYNSKFYLRPHYQLEGL 482

Query: 480 NFELSLVGRLDQA 492
              L LV +L  A
Sbjct: 483 TVSLRLVSKLPSA 495