Pairwise Alignments

Query, 492 a.a., type VI secretion system contractile sheath large subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 491 a.a., type VI secretion protein from Pseudomonas simiae WCS417

 Score =  715 bits (1845), Expect = 0.0
 Identities = 335/490 (68%), Positives = 414/490 (84%)

Query: 2   MSTTEKVLERPQLAQGSLLDEIMAQTRIAPSEEGYDIAKKGVAAFIENLMGSQHSAEPVN 61
           M+T +  L      Q S+LD I+AQT ++  +E Y IAK+GV+AFIE L+  Q+  EPV 
Sbjct: 1   MTTQQHSLPAQTADQYSILDNIVAQTLLSADDEAYGIAKRGVSAFIEELIKPQNRGEPVK 60

Query: 62  KSLVDQMLVELDKKISAQMDEILHNSQFQAMESAWRGLKLFVDRTDFRENNKVEILHVTK 121
           K LVD+M+ E+D K+S QMDEILH+  FQA+E++W+GL+L VDRT+FREN K+E+L++++
Sbjct: 61  KRLVDRMIAEIDTKLSLQMDEILHHPDFQALEASWKGLQLLVDRTNFRENIKIELLNISR 120

Query: 122 DELLEDFEFAPETAQSGLYKHVYSAGYGQFGGEPVGAIIGNYAFTPSTPDMKLLQYMGAL 181
            +LLEDFE +PE  QSGLYKH+YSA YGQFGG+PVGAII NY  +PS PD+KL+QY  ++
Sbjct: 121 QDLLEDFEDSPELTQSGLYKHIYSAEYGQFGGQPVGAIIANYFLSPSAPDVKLMQYASSV 180

Query: 182 GAMAHAPFISSVGPEFFGIDSFEELPNIKDLKSTFESPKYTKWRSLRESEDARYLGLTAP 241
             MAHAPFI++ GP FFG++SF  LP++KDLK  FE P++ KW+S R+SEDARY+GLT P
Sbjct: 181 ACMAHAPFIAAAGPGFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDARYIGLTVP 240

Query: 242 RFLLRVPYDPIENPVKSFNYAENVSASHEHYLWGNTAFAFATRLTDSFAKYRWCPNIIGP 301
           RFLLR PYDP+E PVK+F Y ENV  SHEHYLWGNTA+AFATRLTDSFA++RWCPNIIGP
Sbjct: 241 RFLLRTPYDPLECPVKTFAYQENVVNSHEHYLWGNTAYAFATRLTDSFARFRWCPNIIGP 300

Query: 302 QSGGAVEDLPVHVFESMGALQSKIPTEVLITDRKEFELAEEGFIALTMRKGSDNAAFFSA 361
           QSGGAVEDLP+H F SMG +++KIPTEVL++DR+E+ELA+EGFIALTMRKGSDNAAFFSA
Sbjct: 301 QSGGAVEDLPLHHFHSMGEIETKIPTEVLVSDRREYELAQEGFIALTMRKGSDNAAFFSA 360

Query: 362 NSIQKPKVFPNTKEGKEAETNYKLGTQLPYMMIINRLAHYVKVLQREQIGAWKERQDLER 421
           +S+QKPK F  + EGKEAE NY+LGTQLPYMM++NRLAHY+KVLQREQ+G+WKER DLE 
Sbjct: 361 SSVQKPKHFGLSPEGKEAELNYRLGTQLPYMMVVNRLAHYLKVLQREQLGSWKERTDLEL 420

Query: 422 ELNSWIKQYVADQENPPADVRSRRPLRAARIEVMDVEGNPGWYQVSLSVRPHFKYMGANF 481
           ELN WI+QYVADQENP A+VR RRPLRAARI V DV+G PGWY+V+LSVRPHFKYMGA+F
Sbjct: 421 ELNKWIRQYVADQENPSAEVRGRRPLRAARIVVSDVDGEPGWYRVNLSVRPHFKYMGADF 480

Query: 482 ELSLVGRLDQ 491
            LSLVG+LD+
Sbjct: 481 TLSLVGKLDK 490