Pairwise Alignments

Query, 492 a.a., type VI secretion system contractile sheath large subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 498 a.a., type VI secretion system contractile sheath large subunit from Variovorax sp. OAS795

 Score =  359 bits (922), Expect = e-103
 Identities = 188/482 (39%), Positives = 278/482 (57%), Gaps = 9/482 (1%)

Query: 13  QLAQGSLLDEIMAQTRIAPSEEGYDIAKKGVAAFIENLMGSQHSAEPVNKSLVDQMLVEL 72
           Q+A  S    ++ +     +EE     +  V    E  + +  +      S ++ ++ E+
Sbjct: 14  QIADASDFSLLLDKEFKPKTEEARGAVEAAVRTLAEQALVNASTMTDDAYSSIEAIIAEI 73

Query: 73  DKKISAQMDEILHNSQFQAMESAWRGLKLFVDRTDFRENNKVEILHVTKDELLEDFEFAP 132
           D+K+S Q++ +LH  +FQ +ESAWRG+   V  T+  E  K+  + V+KDEL        
Sbjct: 74  DRKLSEQINLVLHKEEFQKLESAWRGMHHLVSNTETDEKLKIRFMDVSKDELRRTMRRHK 133

Query: 133 ETA--QSGLYKHVYSAGYGQFGGEPVGAIIGNYAFTPSTPDMKLLQYMGALGAMAHAPFI 190
             A  QS ++K +Y   YGQ GGEP G ++ +Y F  +  D++LL  +  + A +HAPFI
Sbjct: 134 GIAWDQSPVFKRIYEEEYGQLGGEPYGCLVADYYFDHTPADVELLGAIAKISAASHAPFI 193

Query: 191 SSVGPEFFGIDSFEELPNIKDLKSTFESPKYTKWRSLRESEDARYLGLTAPRFLLRVPYD 250
           +   P   G++S++EL N +DL     + ++  W SLR++ED+RY+GL  PRFL R+PY 
Sbjct: 194 AGSAPSLLGMESWQELANPRDLAKITSNLEHAPWNSLRDTEDSRYVGLAMPRFLARLPYG 253

Query: 251 PIENPVKSFNYAENV-SASHEHYLWGNTAFAFATRLTDSFAKYRWCPNIIGPQSGGAVED 309
              NPV  F++ E    A H++Y+W N A+A A  +  SF  Y WC  I G +SGG VE+
Sbjct: 254 VKTNPVDEFDFEEETDGADHKNYVWNNAAYAMAVNINRSFKLYGWCTMIRGVESGGTVEN 313

Query: 310 LPVHVFES-MGALQSKIPTEVLITDRKEFELAEEGFIALTMRKGSDNAAFFSANSIQKPK 368
           LP H F +  G    K PTE+ I+DR+E ELA+ G I L  RK +D+AAF  A S+QKP+
Sbjct: 314 LPCHTFPTDDGGFDMKCPTEIAISDRREAELAKAGLIPLVHRKNTDHAAFIGAQSMQKPQ 373

Query: 369 VFPNTKEGKEAETNYKLGTQLPYMMIINRLAHYVKVLQREQIGAWKERQDLERELNSWIK 428
            + +     +A  N  L  +LPY+    R AHY+K + R++IG +KER D++R LN WI 
Sbjct: 374 EYMDL----DATANANLSARLPYLFASTRFAHYLKCIVRDKIGTFKERDDMQRWLNEWIM 429

Query: 429 QYV-ADQENPPADVRSRRPLRAARIEVMDVEGNPGWYQVSLSVRPHFKYMGANFELSLVG 487
            YV AD  N   D ++RRPL AA + V D+EGNPG+Y     +RPHF+  G    L LV 
Sbjct: 430 HYVDADPTNSSQDTKARRPLAAAEVVVEDIEGNPGFYSAKFFLRPHFQLEGLTVSLRLVA 489

Query: 488 RL 489
           +L
Sbjct: 490 KL 491