Pairwise Alignments

Query, 492 a.a., type VI secretion system contractile sheath large subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 496 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  709 bits (1829), Expect = 0.0
 Identities = 328/477 (68%), Positives = 406/477 (85%)

Query: 14  LAQGSLLDEIMAQTRIAPSEEGYDIAKKGVAAFIENLMGSQHSAEPVNKSLVDQMLVELD 73
           L+  +LLD+IMA+T++ P++EGY IA++GV+AFI  ++ S    + +NK   DQM+ E+D
Sbjct: 18  LSNTTLLDQIMAETKLVPAQEGYQIARQGVSAFITEILKSNDPDQLINKHRADQMIAEID 77

Query: 74  KKISAQMDEILHNSQFQAMESAWRGLKLFVDRTDFRENNKVEILHVTKDELLEDFEFAPE 133
           + +  QMD ILH  +FQ +ES+WR LKL VDRTDFREN K+EILHV+K++LL+DFE A +
Sbjct: 78  RMLGKQMDAILHQPEFQQLESSWRSLKLLVDRTDFRENIKLEILHVSKEDLLDDFENAAD 137

Query: 134 TAQSGLYKHVYSAGYGQFGGEPVGAIIGNYAFTPSTPDMKLLQYMGALGAMAHAPFISSV 193
              SG+YKHVY+AGYGQFGGEPV A++GNY F PS+PD+KLL YM ++GAM+HAPF+++ 
Sbjct: 138 VTCSGIYKHVYTAGYGQFGGEPVAAMVGNYNFGPSSPDIKLLSYMASVGAMSHAPFLAAP 197

Query: 194 GPEFFGIDSFEELPNIKDLKSTFESPKYTKWRSLRESEDARYLGLTAPRFLLRVPYDPIE 253
            PEFF ++SFEELPN+K++K  F  P++ KWR+ RESEDAR++ LT PRF+LR  Y P E
Sbjct: 198 APEFFNLNSFEELPNLKEIKDLFAGPRHAKWRAFRESEDARHVALTGPRFMLRSAYHPQE 257

Query: 254 NPVKSFNYAENVSASHEHYLWGNTAFAFATRLTDSFAKYRWCPNIIGPQSGGAVEDLPVH 313
            P++SFNY E+++  H++YLWGN+AF  A+ + DSFA+YRWCPNIIGPQSGGAVEDLPVH
Sbjct: 258 QPIESFNYNEDIAGQHDNYLWGNSAFLLASCINDSFARYRWCPNIIGPQSGGAVEDLPVH 317

Query: 314 VFESMGALQSKIPTEVLITDRKEFELAEEGFIALTMRKGSDNAAFFSANSIQKPKVFPNT 373
           ++ES+G LQ+KIPTEVLI+DRKEFELAEEGFIALTMRK SDNAAFFSANS+QKPK FP T
Sbjct: 318 LYESLGQLQAKIPTEVLISDRKEFELAEEGFIALTMRKDSDNAAFFSANSVQKPKHFPKT 377

Query: 374 KEGKEAETNYKLGTQLPYMMIINRLAHYVKVLQREQIGAWKERQDLERELNSWIKQYVAD 433
            EG +A+TNYKLGTQLPY+ I+NRLAHY+KVLQREQIG+WKER+DLE ELN WIKQYVAD
Sbjct: 378 PEGLQAQTNYKLGTQLPYLFIVNRLAHYIKVLQREQIGSWKERRDLESELNKWIKQYVAD 437

Query: 434 QENPPADVRSRRPLRAARIEVMDVEGNPGWYQVSLSVRPHFKYMGANFELSLVGRLD 490
           QENP ADVRSRRPLRAARIEV DV G+PGWYQVSL+VRPHFKYMGANFE+SLVGRLD
Sbjct: 438 QENPSADVRSRRPLRAARIEVSDVAGDPGWYQVSLAVRPHFKYMGANFEISLVGRLD 494