Pairwise Alignments

Query, 492 a.a., type VI secretion system contractile sheath large subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 499 a.a., type VI secretion system contractile sheath large subunit from Erwinia amylovora T8

 Score =  366 bits (939), Expect = e-105
 Identities = 182/430 (42%), Positives = 268/430 (62%), Gaps = 9/430 (2%)

Query: 65  VDQMLVELDKKISAQMDEILHNSQFQAMESAWRGLKLFVDRTDFRENNKVEILHVTKDEL 124
           +  ++ E+D+K+S Q+++I+H+  FQ +E AWRGL   V+ T+  E  K+  + ++K EL
Sbjct: 66  IQALIAEIDEKLSLQVNQIIHHEDFQQLEGAWRGLSYLVNNTETDEMLKIRFMSISKQEL 125

Query: 125 LEDFEFAPETA--QSGLYKHVYSAGYGQFGGEPVGAIIGNYAFTPSTPDMKLLQYMGALG 182
               +     +  QS ++K +Y   YGQFGGEP G ++G+Y F  S  D++LL  M  +G
Sbjct: 126 GRTLKRYKGVSWDQSPIFKKIYEEEYGQFGGEPFGCLVGDYYFDHSPQDVELLSEMARIG 185

Query: 183 AMAHAPFISSVGPEFFGIDSFEELPNIKDLKSTFESPKYTKWRSLRESEDARYLGLTAPR 242
           + AH PFI+   P    ++S++EL N +DL   F++ +Y  WRSLRESEDARYLGL  PR
Sbjct: 186 SAAHCPFITGTAPGVMQMESWQELANPRDLTKIFQNTEYAAWRSLRESEDARYLGLVMPR 245

Query: 243 FLLRVPYDPIENPVKSFNYAENV-SASHEHYLWGNTAFAFATRLTDSFAKYRWCPNIIGP 301
           FL R+PY    NPV SF++ E    A+H +Y W N A+A A  +  SF  + WC +I G 
Sbjct: 246 FLSRLPYGIRTNPVDSFDFEEQTDGANHGNYTWTNAAYAMAANINRSFKDFGWCTSIRGV 305

Query: 302 QSGGAVEDLPVHVFES-MGALQSKIPTEVLITDRKEFELAEEGFIALTMRKGSDNAAFFS 360
           +SGGAVE+LP H F S  G +  K PTE+ I+DR+E ELA+ GF+ L  RK SD AAF  
Sbjct: 306 ESGGAVENLPCHTFPSDDGGVDMKCPTEIAISDRREAELAKNGFMPLVHRKNSDFAAFIG 365

Query: 361 ANSIQKPKVFPNTKEGKEAETNYKLGTQLPYMMIINRLAHYVKVLQREQIGAWKERQDLE 420
           A S+QKP  + +     +A  N +L  +LPY+    R AHY+K + R++IG+++ER ++E
Sbjct: 366 AQSLQKPAEYHDA----DATANARLAARLPYLFACCRFAHYLKCIVRDKIGSFRERDEME 421

Query: 421 RELNSWIKQYV-ADQENPPADVRSRRPLRAARIEVMDVEGNPGWYQVSLSVRPHFKYMGA 479
           R LN W+  YV  D  N   + +SR+PL +A ++V ++E NPG+Y     +RPH++  G 
Sbjct: 422 RWLNDWVMNYVDGDTANSSQETKSRKPLASAEVQVQEIEDNPGYYAAKFFLRPHYQLEGL 481

Query: 480 NFELSLVGRL 489
              L LV +L
Sbjct: 482 TVSLRLVSKL 491