Pairwise Alignments

Query, 492 a.a., type VI secretion system contractile sheath large subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 512 a.a., type VI secretion protein, EvpB/VC_A0108 family from Enterobacter asburiae PDN3

 Score =  424 bits (1089), Expect = e-123
 Identities = 205/452 (45%), Positives = 303/452 (67%), Gaps = 5/452 (1%)

Query: 42  GVAAFIENLMGSQHSAEPVNKSLVDQMLVELDKKISAQMDEILHNSQFQAMESAWRGLKL 101
           G+  F+E L  +    E ++KSL+D  + ELD +IS Q+D ++H+ +FQA+ES WRG+K 
Sbjct: 63  GMQVFLECLTKAGAKVEKLDKSLIDHHIAELDYQISRQLDAVMHHDEFQAVESLWRGVKS 122

Query: 102 FVDRTDFRENNKVEILHVTKDELLEDFEFAPETAQSGLYKHVYSAGYGQFGGEPVGAIIG 161
            VD+TDFR+N K+E+L ++K++L +DFE +PE  QSGLYKH Y   Y   GGEP+ A+I 
Sbjct: 123 LVDKTDFRQNVKIELLSMSKEDLRQDFEDSPEIIQSGLYKHAYIDEYDTPGGEPIAALIS 182

Query: 162 NYAFTPSTPDMKLLQYMGALGAMAHAPFISSVGPEFFGIDSFEELPNIKDLKSTFESPKY 221
            Y F  S  D+ LL+ +  + A AH PFI S GP+FF  +S E++  IKD+ + F+  +Y
Sbjct: 183 AYEFDASAQDVALLRNISKVSAAAHMPFIGSAGPKFFLKESMEDVAAIKDIGNYFDRAEY 242

Query: 222 TKWRSLRESEDARYLGLTAPRFLLRVPYDPIENPVKSFNYAENVSA-SHEHYLWGNTAFA 280
            KW+S R+++DARY+GL  PR L R+PY P   PV+SFNY E V    H+ YLW N +FA
Sbjct: 243 IKWKSFRDTDDARYIGLVMPRVLGRLPYGPDTVPVRSFNYVEEVKGPDHDKYLWTNASFA 302

Query: 281 FATRLTDSFAKYRWCPNIIGPQSGGAVEDLPVHVFESMGALQSKIPTEVLITDRKEFELA 340
           FA+ +  SF    WC  I GPQ+GGAV+DLP+H+++     Q KIP+EV+I + +EFE A
Sbjct: 303 FASNMVRSFINNGWCVQIRGPQAGGAVQDLPIHLYDLGTGNQVKIPSEVMIPETREFEFA 362

Query: 341 EEGFIALTMRKGSDNAAFFSANSIQKPKVFPNTKEGKEAETNYKLGTQLPYMMIINRLAH 400
             GFI L+  K  D A FFSANS QKP ++    +  +A  N ++  +LPY+ +++R+AH
Sbjct: 363 NLGFIPLSYYKNRDYACFFSANSTQKPALY----DTADATANSRINARLPYIFLLSRIAH 418

Query: 401 YVKVLQREQIGAWKERQDLERELNSWIKQYVADQENPPADVRSRRPLRAARIEVMDVEGN 460
           Y+K++QRE IG  K+R+ LE ELN+W++  V +  +P  ++++  PLR A++ V D+E N
Sbjct: 419 YLKLIQRENIGTTKDRRLLELELNTWVRSLVTEMTDPGDELQASHPLRDAKVVVEDIEDN 478

Query: 461 PGWYQVSLSVRPHFKYMGANFELSLVGRLDQA 492
           PG+++V L   PHF+  G +  LSLV ++ +A
Sbjct: 479 PGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKA 510