Pairwise Alignments

Query, 492 a.a., type VI secretion system contractile sheath large subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  364 bits (934), Expect = e-105
 Identities = 192/489 (39%), Positives = 294/489 (60%), Gaps = 9/489 (1%)

Query: 4   TTEKVLERPQLAQGSLLDEIMAQTRIAPSEEGYDIAKKGVAAFIENLMGSQHSAEPVNK- 62
           TTE  +E    A  SLLD +M + ++A  E     A+  ++ F++ ++     A  V+  
Sbjct: 2   TTEMSVE--STASASLLDRMMVEGKMAREEGQRPYARDLLSEFVDQVVAETGDAVAVDVV 59

Query: 63  SLVDQMLVELDKKISAQMDEILHNSQFQAMESAWRGLKLFVDRTDFRENNKVEILHVTKD 122
             ++  + ++D+ IS Q++E+LH+  FQ +E+ WRGL   V  ++  +  K+ +L+ ++ 
Sbjct: 60  EAINHRIAQIDELISLQLNEVLHHEDFQKLEATWRGLNYLVMNSETGKQLKIRVLNSSRK 119

Query: 123 ELLEDFEFAPETAQSGLYKHVYSAGYGQFGGEPVGAIIGNYAFTPSTPDMKLLQYMGALG 182
           +L +D + A E  QS L+K VY A YG  GG P   +IG+Y F     D+ L++ +  + 
Sbjct: 120 DLQKDLDSAVEFDQSALFKMVYEAEYGTLGGTPYSVLIGDYEFGRHPQDISLIEKISNVA 179

Query: 183 AMAHAPFISSVGPEFFGIDSFEELPNIKDLKSTFESPKYTKWRSLRESEDARYLGLTAPR 242
           A AHAPFI++  P+ F +DSF EL   +DL   FE+ + TKWRS R SED+RY+ L  P 
Sbjct: 180 AAAHAPFIAAASPKMFDMDSFSELSGPRDLSKIFETAEMTKWRSFRASEDSRYVALVMPH 239

Query: 243 FLLRVPYDPIENPVKSFNYAENVSA-SHEHYLWGNTAFAFATRLTDSFAKYRWCPNIIGP 301
            LLR+PY P   PV+  N+ E+V    H  YLWGN ++A   R+TD+FAKY W   I G 
Sbjct: 240 TLLRLPYGPKTVPVEGVNFVEDVDGRDHSKYLWGNASWALGARITDAFAKYGWTAAIRGV 299

Query: 302 QSGGAVEDLPVHVFES-MGALQSKIPTEVLITDRKEFELAEEGFIALTMRKGSDNAAFFS 360
           + GG V  LP H F++  G +  K PTE+ ITDR+E EL + GFI+L   K +D AAFF 
Sbjct: 300 EGGGRVGGLPTHTFKTDEGDVALKCPTEIAITDRREKELNDLGFISLVHCKNTDYAAFFG 359

Query: 361 ANSIQKPKVFPNTKEGKEAETNYKLGTQLPYMMIINRLAHYVKVLQREQIGAWKERQDLE 420
             +  KPKV+ NT    EA  N +L   LPYM++ +R AHY+KV+ R++IG++  R +++
Sbjct: 360 GQTANKPKVY-NT---NEANANARLSAMLPYMLVSSRFAHYLKVMLRDKIGSFTTRGNVQ 415

Query: 421 RELNSWIKQYVADQENPPADVRSRRPLRAARIEVMDVEGNPGWYQVSLSVRPHFKYMGAN 480
             LN+WI  Y+   ++   D+++R PLR AR++V +V G PG Y+ ++ +RPHF+    +
Sbjct: 416 SYLNTWIGNYILLDDDASQDMKARFPLREARVDVYEVPGRPGVYRANVFLRPHFQLEELS 475

Query: 481 FELSLVGRL 489
             + LV  L
Sbjct: 476 ASIRLVAEL 484