Pairwise Alignments

Query, 492 a.a., type VI secretion system contractile sheath large subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  248 bits (634), Expect = 2e-70
 Identities = 140/433 (32%), Positives = 230/433 (53%), Gaps = 16/433 (3%)

Query: 55  HSAEPVNKSLVDQMLVELDKKISAQMDEILHNSQFQAMESAWRGLKLFVDRTDFRENNKV 114
           H + P  +   DQ++  +D+ ++ Q++ ILH+  FQAME  WRGL + V       + KV
Sbjct: 3   HQSFPDARIFADQLIALIDEALTGQVNAILHHPDFQAMEGRWRGLAMVVREAGRSTDVKV 62

Query: 115 EILHVTKDELLEDFEFAPETAQSGLYKHVYSAGYGQFGGEPVGAIIGNYAFTP----STP 170
           ++L+ +  +L  + E A +  QS L++ VY+  +G  GGEPVG +IG+YAF+P       
Sbjct: 63  KLLNASWRDLARNTERATDFDQSHLFEVVYNREFGMPGGEPVGLMIGDYAFSPDDLQGAD 122

Query: 171 DMKLLQYMGALGAMAHAPFISSVGPEFFGIDSFEELPNIKDLKSTFESPKYTKWRSLRES 230
            +  L  +G + A A  PF+++  P   G+  F EL  + D  S  +     +W +LR  
Sbjct: 123 SITTLSQIGMVAAAAFCPFVAAAAPSAVGLQDFSELSRVHDFSSLKQEKSRLRWNALRAR 182

Query: 231 EDARYLGLTAPRFLLRVPYDP-IENPVKSFNYAENVSASHEHYLWGNTAFAFATRLTDSF 289
           +D+R++GL APR LLR PY P        F + E+V+ S E  LWGN AFAFAT +  +F
Sbjct: 183 DDSRFVGLVAPRVLLRSPYRPYARGRDDGFPFREHVAESGETLLWGNAAFAFATVVVRNF 242

Query: 290 AKYRWCPNIIG----PQSGGAVEDLPVHVFE---SMGALQSKIPTEVLITDRKEFELAEE 342
               W  ++ G       GG +    +  F+       L ++ P EV +T  +E + ++ 
Sbjct: 243 VDSGWFADLRGVTQDAVDGGMLSPRQLPPFDLGIESNGLSAQPPVEVQLTTGQEQQFSDL 302

Query: 343 GFIALTMRKGSDNAAFFSANSIQKPKVFPNTKEGKEAETNYKLGTQLPYMMIINRLAHYV 402
           G + ++    S  A F +  S+  P  +      + A  N +L   L Y++  +R +HY+
Sbjct: 303 GIVPVSTTYLSGMAIFNANQSLHAPGHYST----EAARQNARLAAMLQYVLCASRFSHYL 358

Query: 403 KVLQREQIGAWKERQDLERELNSWIKQYVADQENPPADVRSRRPLRAARIEVMDVEGNPG 462
           KV+ R+ IG   +   +ER+L SW+  Y    ++  A +R+R PLR+A I V +V G PG
Sbjct: 359 KVIMRDDIGQLSDATTIERKLESWLSSYTLGNDDAEASLRTRYPLRSAGINVFEVPGKPG 418

Query: 463 WYQVSLSVRPHFK 475
            +  ++ ++PHF+
Sbjct: 419 TFSCTVRLQPHFQ 431