Pairwise Alignments

Query, 492 a.a., type VI secretion system contractile sheath large subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 493 a.a., hypothetical protein from Acinetobacter radioresistens SK82

 Score =  379 bits (973), Expect = e-109
 Identities = 197/478 (41%), Positives = 290/478 (60%), Gaps = 7/478 (1%)

Query: 18  SLLDEIMAQTRIAPSEEGYDIAKKGVAAFIENLMGSQHSAEPVNKSLVDQMLVELDKKIS 77
           +LLD I+ Q+RIA +EE +D AK  +    + +M    +        +D+ + E+D  IS
Sbjct: 18  NLLDSIVEQSRIARNEEEHDRAKSLIGELAKEVMAGTITVSENMTLSIDKRIAEIDALIS 77

Query: 78  AQMDEILHNSQFQAMESAWRGLKLFVDRTDFRENNKVEILHVTKDELLEDFEFAPETAQS 137
            Q+ +I+HN QFQ +ES WRGL  F   T      K+ +L+ TK EL++DF+ A +  QS
Sbjct: 78  GQLSQIMHNEQFQKIESTWRGLYYFCQETPSNPMIKIRMLNTTKKELVKDFQGATDFDQS 137

Query: 138 GLYKHVYSAGYGQFGGEPVGAIIGNYAFTPSTPDMKLLQYMGALGAMAHAPFISSVGPEF 197
            L+K +Y   YG FGG P  A+IG++ F  +  DM LL+ +  + A AHAPFIS+  P  
Sbjct: 138 TLFKKIYEEEYGSFGGAPYAALIGDFEFDRTPSDMYLLEQISHIAAAAHAPFISAASPSI 197

Query: 198 FGIDSFEELPNIKDLKSTFESPKYTKWRSLRESEDARYLGLTAPRFLLRVPYDPIE-NPV 256
            G++SF ++   +D+   FE+ +Y +WRS R+SEDARY+ LT PR L R+PY P E    
Sbjct: 198 LGLESFTDIDRPRDVSKIFETAEYVQWRSFRDSEDARYVALTMPRVLGRLPYHPKEGTAT 257

Query: 257 KSFNYAENVSAS-HEHYLWGNTAFAFATRLTDSFAKYRWCPNIIGPQSGGAVEDLPVHVF 315
           + FN+AE VS   H+ YLW N A+AF TRLT++F  Y WC  I G + GG VE LPVH F
Sbjct: 258 EGFNFAEEVSGQHHDEYLWMNAAYAFGTRLTNAFDLYGWCAAIRGVEGGGLVEGLPVHTF 317

Query: 316 ESM-GALQSKIPTEVLITDRKEFELAEEGFIALTMRKGSDNAAFFSANSIQKPKVFPNTK 374
           ++  G +  K PTE+ ITDR+E EL++ GFI L   K +D AAFF A S QKPK + N  
Sbjct: 318 KTPDGEVLLKCPTEIAITDRREKELSDLGFIPLVHCKNTDYAAFFGAQSAQKPKKYDN-- 375

Query: 375 EGKEAETNYKLGTQLPYMMIINRLAHYVKVLQREQIGAWKERQDLERELNSWIKQYVADQ 434
               A  N  L +Q+ Y+M ++R+AHY+K + R+++G++    ++E  LN W+ QYV   
Sbjct: 376 --DTANANSALSSQIQYIMAVSRIAHYLKAMMRDKVGSFASAGNVEAFLNEWLSQYVLLD 433

Query: 435 ENPPADVRSRRPLRAARIEVMDVEGNPGWYQVSLSVRPHFKYMGANFELSLVGRLDQA 492
           +    + +++ PLR A ++V++    PG Y+  + +RPHF+    +  L LV  L Q+
Sbjct: 434 DGASQEAKAQYPLREASVKVVEDPAQPGHYKSVVFLRPHFQLDELSVSLRLVTELPQS 491