Pairwise Alignments

Query, 168 a.a., type VI secretion system contractile sheath small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 191 a.a., T6SS component TssB (ImpB/VipA) from Variovorax sp. SCN45

 Score = 83.6 bits (205), Expect = 2e-21
 Identities = 52/159 (32%), Positives = 82/159 (51%), Gaps = 4/159 (2%)

Query: 12  RINIKYIPATGDAQAEVELPLKTLVVGDFKGHAEQT--PLEERATVTVDKNNFEAVMRES 69
           R+ I Y    GDA  + ELPL   ++ D  G   Q    L+ER  V +D++NF+ V+   
Sbjct: 16  RVQITYDVEIGDAVEKKELPLVVGLLADLSGQPVQPLPKLKERRFVEIDRDNFDEVLGNI 75

Query: 70  ELKITATVKNKLTDDENAELPVELNFKSLADFAPDAVASQVPELKKLIELREALVALKGP 129
             ++  +V + L  D N  L +ELNFK   DF P+A+ SQVP L KL+E R+ L  L   
Sbjct: 76  SPRLDLSVSDTLKGDGN--LKIELNFKEFGDFHPEAIVSQVPRLAKLLEARQQLRDLLAK 133

Query: 130 LGNIPAFRERLQSLLNSEESREKLLAELNLLSGQEEPQA 168
           L       + L++++ + E  + + ++    +G   P A
Sbjct: 134 LDGNDELDDLLENVVKNSEDLKAVQSQAKAEAGTAAPAA 172