Pairwise Alignments

Query, 168 a.a., type VI secretion system contractile sheath small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 167 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  173 bits (439), Expect = 1e-48
 Identities = 90/166 (54%), Positives = 120/166 (72%), Gaps = 3/166 (1%)

Query: 3   KEGSVAPKERINIKYIPATGDAQAEVELPLKTLVVGDFKGHAEQTPLEERATVTVDKNNF 62
           +  SVAPKERINIKY+PATGD QAEVELP K +V+GDF G  +   LE+R  + +DK+ F
Sbjct: 4   RSDSVAPKERINIKYVPATGDEQAEVELPHKMMVLGDF-GLDDSRSLEDRQVMRIDKHTF 62

Query: 63  EAVMRESELKITATVKNKLTDDENAELPVELNFKSLADFAPDAVASQVPELKKLIELREA 122
             V+ ++++ +  +V + L    NAEL V L FKS+ DF PD +A QVPEL KL++LREA
Sbjct: 63  NNVLNDADVSLAMSVPSALDATPNAELAVNLQFKSIQDFGPDRIARQVPELNKLLQLREA 122

Query: 123 LVALKGPLGNIPAFRERLQSLLNSEESREKLLAELNLLSGQEEPQA 168
           LVALKGPLGN+P FR++LQ LLN   +R++L  EL+L+   E P+A
Sbjct: 123 LVALKGPLGNVPTFRKQLQQLLNDAHARKQLAQELDLV--LEAPKA 166