Pairwise Alignments

Query, 168 a.a., type VI secretion system contractile sheath small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 167 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  175 bits (443), Expect = 4e-49
 Identities = 90/161 (55%), Positives = 121/161 (75%), Gaps = 2/161 (1%)

Query: 1   MSKE-GSVAPKERINIKYIPATGDAQAEVELPLKTLVVGDFKGHAEQTPLEERATVTVDK 59
           MSK  GSVAPKER+NIKY+PAT D QAEVELP K LV+GDF G  +   LE+R  + +DK
Sbjct: 1   MSKNTGSVAPKERVNIKYVPATSDEQAEVELPHKMLVLGDF-GLDDSRALEDRQVMRIDK 59

Query: 60  NNFEAVMRESELKITATVKNKLTDDENAELPVELNFKSLADFAPDAVASQVPELKKLIEL 119
           + F +V+ ++ + +  TV ++L    + EL V L F+S+ DF PD +A QVPEL KL+ L
Sbjct: 60  HTFNSVLNDANVSLDVTVPSRLGTAPDTELAVHLQFRSINDFGPDRIARQVPELNKLLAL 119

Query: 120 REALVALKGPLGNIPAFRERLQSLLNSEESREKLLAELNLL 160
           REALVALKGPLGN+PAFR++LQ LLN+E++R++L  EL+L+
Sbjct: 120 REALVALKGPLGNVPAFRKQLQHLLNNEQARKQLAQELDLV 160