Pairwise Alignments

Query, 168 a.a., type VI secretion system contractile sheath small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 166 a.a., type VI secretion system contractile sheath small subunit from Escherichia coli ECRC62

 Score =  110 bits (274), Expect = 2e-29
 Identities = 63/156 (40%), Positives = 90/156 (57%), Gaps = 1/156 (0%)

Query: 9   PKERINIKYIPATGDAQAEVELPLKTLVVGDFKGHAEQTPLEERATVTVDKNNFEAVMRE 68
           P  R+NIK    TG+A+ +VELPLK L VGD+    EQ PL ER  + ++KNNF +VM E
Sbjct: 10  PAARVNIKLDLHTGNAKKKVELPLKLLAVGDYSNGKEQRPLSERDKIDINKNNFNSVMAE 69

Query: 69  SELKITATVKNKLTDDENAELPVELNFKSLADFAPDAVASQVPELKKLIELREALVALKG 128
               +  TV++ L+   N E  + L FKSL DF P+ VA  +P+L+ L+ +R  L  LK 
Sbjct: 70  FSPAVNLTVEDTLSGSGN-EQNIALEFKSLKDFEPEQVAKNIPQLRVLLAMRNLLRDLKS 128

Query: 129 PLGNIPAFRERLQSLLNSEESREKLLAELNLLSGQE 164
            L +   FR  L+++L       +L  EL  ++ QE
Sbjct: 129 NLLDNATFRRELENILKDPTLSSELRDELAKIAPQE 164