Pairwise Alignments

Query, 168 a.a., type VI secretion system contractile sheath small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 169 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score = 85.5 bits (210), Expect = 4e-22
 Identities = 55/158 (34%), Positives = 78/158 (49%), Gaps = 3/158 (1%)

Query: 10  KERINIKYIPATGDAQAEVELPLKTLVVGDFKGHAEQT--PLEERATVTVDKNNFEAVMR 67
           K R++IKY   T  A    ELP    V+GDF G+  Q   P  ER  V +D++NF+ VMR
Sbjct: 13  KPRVHIKYEVETEGAMVVKELPFVVGVLGDFSGNPTQPLKPFGERKFVQIDRDNFDEVMR 72

Query: 68  ESELKITATVKNKLTDDENAELPVELNFKSLADFAPDAVASQVPELKKLIELREALVALK 127
                +  +V N L  D   ++ V L F+S+ DF P AV  QVP LK L++ R  L  L 
Sbjct: 73  RMTPGLNISVANTLQKD-GTDMQVNLKFESMDDFEPGAVVQQVPALKALLDARNELRDLL 131

Query: 128 GPLGNIPAFRERLQSLLNSEESREKLLAELNLLSGQEE 165
                       L+ +L ++     L++EL   +G  E
Sbjct: 132 SKADRSEDLERMLEDILQNKTDLATLVSELKEKNGASE 169