Pairwise Alignments

Query, 94 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 89 a.a., PAAR domain-containing protein from Erwinia tracheiphila SCR3

 Score = 50.8 bits (120), Expect = 3e-12
 Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 10/85 (11%)

Query: 12 TDHDGFPPTPVTAGSATVRYDGIPAARLGDPLAPHDKPKHPSHGRA-IAAGSGTVMIDGK 70
          T H G     + +GS  V  +G+ AA +G  +AP        HG A +A GSGTV I+G 
Sbjct: 12 TGHGG----ALVSGSGNVFINGLSAATVGLSIAPCAL----LHGAAPVACGSGTVFINGF 63

Query: 71 PAARVGDAVDCGG-VLQGASSVNIG 94
          PAAR+GD   CG  ++ G+  V IG
Sbjct: 64 PAARLGDITGCGAPIVSGSGDVFIG 88



 Score = 21.6 bits (44), Expect = 0.002
 Identities = 10/18 (55%), Positives = 11/18 (61%)

Query: 72 AARVGDAVDCGGVLQGAS 89
          AAR+GDA   GG L   S
Sbjct: 5  AARLGDATGHGGALVSGS 22