Pairwise Alignments

Query, 559 a.a., RluA family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., 23S rRNA pseudouridine(1911/1915/1917) synthase RluD from Rhodanobacter sp000427505 FW510-R12

 Score = 96.3 bits (238), Expect = 2e-24
 Identities = 73/229 (31%), Positives = 116/229 (50%), Gaps = 26/229 (11%)

Query: 347 LSNPAQGQDITIVYQDDAIVVVNKPAEFLSVPGV-HVHDSVLTRL---KAQFTQAEGVFA 402
           +++ A+   + IV++D+ ++V++KPA  +  PG  +   ++L  L     +  +      
Sbjct: 73  VASAAEDIALAIVHEDEHLLVLDKPAGLVVHPGAGNPAGTLLNALLHHDPRLAELPRAGI 132

Query: 403 LHRLDMSTSGLLVFALTRRANKQLQKQFISRAVQKRYVALIEGKLSETQGEIQLPLCGDL 462
           +HRLD  TSGL+V A T      L        V+++Y A++ G L    G +  P+   L
Sbjct: 133 VHRLDKDTSGLMVVARTLPTYTALVDLLSRHEVERQYEAVVLGTLV-AGGTVDAPIGRSL 191

Query: 463 DDRPRQKVCWQQ-GKPALTHWETVQVEQNRTRVYLYPHTGRTHQLRVHCAHHLGLNAPIV 521
            DR RQ V  ++ GK A+TH+   +  +  + +     TGRTHQ+RVH AH   ++ P+V
Sbjct: 192 GDRLRQAVRDEEDGKRAVTHYRVRERFRAHSLLQCRLETGRTHQIRVHLAH---ISHPLV 248

Query: 522 GDDLYG-----------------LQDKRLFLHAEQLSFAHPYTKQPMTF 553
           GD LYG                    +R  LHAEQL+F HP T + M+F
Sbjct: 249 GDPLYGGGLKLPKGASAELAAALRGFRRQALHAEQLAFIHPATGEAMSF 297