Pairwise Alignments

Query, 559 a.a., RluA family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 235 a.a., pseudouridine synthase from Rhodanobacter sp000427505 FW510-R12

 Score =  100 bits (249), Expect = 6e-26
 Identities = 73/232 (31%), Positives = 109/232 (46%), Gaps = 46/232 (19%)

Query: 356 ITIVYQDDAIVVVNKPAEFLSVPGVHVHDSVLTRLKAQFT-------QAEGVFALHRLDM 408
           + I+YQDDA++ VNKPA         VH S +     +F          + V+  HRLD 
Sbjct: 2   LDILYQDDALIAVNKPANLA------VHRSKMVGNAEEFLIDLLREQVGDSVYLAHRLDR 55

Query: 409 STSGLLVFALTRRANKQLQKQFISRAVQKRYVALIEGKLSETQGEIQLPLCGDLDDRPRQ 468
           +TSG+L+ A ++     L  QF+ R + KRY+A++ G     +G I  PL G  +  PR+
Sbjct: 56  ATSGVLLVARSKEVAAALGGQFMGRLMHKRYLAVVRGWPEPAEGVIDYPLPGSRETGPRR 115

Query: 469 KVCWQQGKPALTHWE---TVQV--------EQNRTRVYLYPHTGRTHQLRVHCAHHLGLN 517
           +        A TH+    TV V        +Q    +   P +GR  Q+R H AH   ++
Sbjct: 116 E--------ARTHYRRLATVGVPIALGRYPQQRYALLLAEPESGRFRQIRKHLAH---IH 164

Query: 518 APIVGDDLYGLQD-----------KRLFLHAEQLSFAHPYTKQPMTFQVDAD 558
            P++GD  +G  D            R+ LHA +L F HP T + M+ Q   D
Sbjct: 165 HPVIGDCQHGRGDHNRLYKQHFGCHRMLLHAWRLDFRHPQTSESMSLQAPLD 216