Pairwise Alignments

Query, 559 a.a., RluA family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 226 a.a., RNA pseudouridylate synthase from Sphingobium sp. HT1-2

 Score =  102 bits (254), Expect = 2e-26
 Identities = 68/197 (34%), Positives = 101/197 (51%), Gaps = 8/197 (4%)

Query: 358 IVYQDDAIVVVNKPAEF-LSVP--GVHVHDSVLTRLKAQFTQAEGVFALHRLDMSTSGLL 414
           +++ D   ++++KPA   +  P  G    ++ L  L   F +     A+HRLD  TSG L
Sbjct: 8   VLFIDGEAIILDKPAGLPVDAPRDGSIALENHLASLTFGFQRWP--LAVHRLDRDTSGCL 65

Query: 415 VFALTRRANKQLQKQFISRAVQKRYVALIEGKLSETQGEIQLPLCG-DLDDRPRQKVCWQ 473
           + A   +A+K+    F +  V+KRYVA++EG     +G I L L       +  + +  +
Sbjct: 66  LLARNPKAHKRFAAAFEAGTVEKRYVAVLEGVPEADEGTIALSLKKVSTPSQGWRMIAAK 125

Query: 474 QGKPALTHWETVQVEQNRTRVYLYPHTGRTHQLRVHCAHHLGLNAPIVGDDLYGLQDKRL 533
            GKPA+THW  + V+  R  +   P TGRTHQ+RVH  H LG    IVGD +YG     +
Sbjct: 126 AGKPAVTHWRKLAVKDGRALIAFTPETGRTHQIRVHAQHGLGFG--IVGDPVYGDGQGAM 183

Query: 534 FLHAEQLSFAHPYTKQP 550
            LH+  LS      K P
Sbjct: 184 LLHSRFLSVPRGDNKPP 200