Pairwise Alignments

Query, 559 a.a., RluA family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 244 a.a., pseudouridylate synthase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  147 bits (371), Expect = 4e-40
 Identities = 68/118 (57%), Positives = 85/118 (72%)

Query: 228 RIEQLKQQRKQRSAALQKKLFSAYRFTNIRGVEKDLVELFSVTKNPLPPAGSGECAAPKL 287
           +I +L+Q RK+ S ALQ  LF+ Y F N  G EK L E+F       PPAG+GECAAPKL
Sbjct: 126 KIAELQQVRKENSIALQAMLFNQYYFLNQAGEEKSLREIFRNNAGSNPPAGAGECAAPKL 185

Query: 288 LHYAFQHQLRPIALAEFWWGRSPKSEIRQHKKFYPACQSKCQPILAHMLEGMPLEDNP 345
           LHYAF+H ++P+ALAEFWWG SPKS   +H  FYPAC+ KC PILAHML+ + ++D P
Sbjct: 186 LHYAFKHHMKPLALAEFWWGLSPKSAFWKHGAFYPACREKCAPILAHMLQDLVVDDMP 243



 Score =  106 bits (265), Expect = 9e-28
 Identities = 59/155 (38%), Positives = 89/155 (57%), Gaps = 2/155 (1%)

Query: 20  LPERFTFPFCYQPHPLSEIAADELQQHLLTQTDWYHPFGLTE-TDPQAHGKMFGVLVVQH 78
           +PE+FT+P+ Y+PH LS  A+ ELQ++L  Q +W H FGL    + +  GKMFGVLVVQ 
Sbjct: 1   MPEKFTYPYKYKPHALSLQASAELQEYLQHQNEWEHNFGLKSGQEGKVIGKMFGVLVVQT 60

Query: 79  RSGTLGYLAAFSGQLAEQNRLPGFVPPVFDRFADASFFRVDGDQIAAINQQVREQETDPE 138
             G +GYLAAFSG+LA       FVPPV+D   + SF      ++  IN+++   +    
Sbjct: 61  TQGEIGYLAAFSGKLAGGYHHAKFVPPVYDALTEGSFLNNGMQELTRINEEISSLKEAHT 120

Query: 139 LAELASALKQSQLQAEHELSQRRILHNKQRHFRKQ 173
                   +  Q++ E+ ++ + +L N Q +F  Q
Sbjct: 121 AVNQHKIAELQQVRKENSIALQAMLFN-QYYFLNQ 154