Pairwise Alignments

Query, 559 a.a., RluA family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 222 a.a., Pseudouridylate synthases, 23S RNA-specific from Kangiella aquimarina DSM 16071

 Score =  149 bits (375), Expect = 1e-40
 Identities = 83/215 (38%), Positives = 130/215 (60%), Gaps = 13/215 (6%)

Query: 354 QDITIVYQDDAIVVVNKPAEFLSVPGVHVH--DSVLTRLKAQFTQAEGVFALHRLDMSTS 411
           + + I++ D   + VNKPA  LS+PG H    D V+TRL+    +++    +HRLDM+TS
Sbjct: 12  EPVRILHPDKHFLFVNKPAGLLSIPGRHEENKDCVVTRLQ-HHPKSKTASIVHRLDMATS 70

Query: 412 GLLVFALTRRANKQLQKQFISRAVQKRYVALIEGKLSETQGEIQLPLCGDLDDRPRQKVC 471
           G+++ A T+ A++++ KQF  R   K Y+A+++G + +  G I LP+  D  +RP+QK+ 
Sbjct: 71  GVMILAQTKFAHREISKQFELRQTDKYYIAVVDGIVDKDSGVIDLPMIADWPNRPKQKID 130

Query: 472 WQQGKPALTHWETV--QVEQNRTRVYLYPHTGRTHQLRVHCAHHLGLNAPIVGDDLY--- 526
           ++QGK A+T WE +   +++  TR+ L P TGR+HQLR+HC     L  PI+G  LY   
Sbjct: 131 FEQGKKAITEWEVLDRDMDKQTTRLKLKPITGRSHQLRLHC---FELGHPILGCHLYHKN 187

Query: 527 --GLQDKRLFLHAEQLSFAHPYTKQPMTFQVDADF 559
               + KRL LHA  L+  HP T + +T +    F
Sbjct: 188 GSETKAKRLLLHAASLTITHPKTGKTITVESPCPF 222