Pairwise Alignments

Query, 559 a.a., RluA family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., pseudouridine synthase, RluA family from Enterobacter asburiae PDN3

 Score =  107 bits (266), Expect = 9e-28
 Identities = 77/226 (34%), Positives = 113/226 (50%), Gaps = 15/226 (6%)

Query: 344 NPLLSNPAQGQDITIVYQDDAIVVVNKPAEFLSVPGVHVHDSVLTRLKAQFTQAEGVFAL 403
           +P L   A   D+ I+Y+DD I+V+NKP+      G  +   V+  L+A   +A  +  +
Sbjct: 82  SPKLQKVAALSDV-ILYEDDHILVLNKPSGTAVHGGSGLSFGVIEGLRALRPEARFLELV 140

Query: 404 HRLDMSTSGLLVFALTRRANKQLQKQFISRAVQKRYVALIEGKLSETQGEIQLPLCGD-L 462
           HRLD  TSG+L+ A  R A + L +Q   + +QK Y+AL+ G+       +Q PL  + L
Sbjct: 141 HRLDRDTSGVLLVAKKRSALRSLHEQLREKGMQKDYLALVRGQWQSHVKVVQAPLLKNIL 200

Query: 463 DDRPRQKVCWQQGKPALTHWETVQVEQNRTRVYLYPHTGRTHQLRVHCAHHLGLNAPIVG 522
               R     Q+GKP+ T ++  +  +  T V   P TGRTHQ+RVH         PI  
Sbjct: 201 QSGERIVRVSQEGKPSETRFKVEERYEFATLVRCSPVTGRTHQIRVHTQF---AGHPIAF 257

Query: 523 DDLYGLQD----------KRLFLHAEQLSFAHPYTKQPMTFQVDAD 558
           DD YG ++           RLFLHA  L F HP T + +  +   D
Sbjct: 258 DDRYGDREFDKQLAGTGLSRLFLHAAALKFTHPNTGEVIRIEAPLD 303