Pairwise Alignments

Query, 559 a.a., RluA family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 219 a.a., bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA from Escherichia coli ECRC101

 Score =  180 bits (457), Expect = 4e-50
 Identities = 105/219 (47%), Positives = 138/219 (63%), Gaps = 14/219 (6%)

Query: 349 NPAQGQDITIVYQDDAIVVVNKPAEFLSVPG-VHVH-DSVLTRLKAQFTQAEGVFALHRL 406
           NP Q   + I+YQDD I+VVNKP+  LSVPG +  H DSV+TR++  + QAE V   HRL
Sbjct: 7   NPPQEPWLVILYQDDHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDYPQAESV---HRL 63

Query: 407 DMSTSGLLVFALTRRANKQLQKQFISRAVQKRYVALIEGKLSETQGEIQLPLCGDLDDRP 466
           DM+TSG++V ALT+ A ++L++QF  R  +K+YV  + G  S  +G + LPL  D  +RP
Sbjct: 64  DMATSGVIVVALTKAAERELKRQFRERVPKKQYVTRVWGHPSPAEGLVDLPLICDWPNRP 123

Query: 467 RQKVCWQQGKPALTHWETVQ-VEQNRTRVYLYPHTGRTHQLRVHCAHHLGLNAPIVGDDL 525
           +QKVC++ GKPA T +E V+    N  RV L P TGR+HQLRVH    L L  PI+GD  
Sbjct: 124 KQKVCYETGKPAQTEYEVVEYAADNTARVVLKPITGRSHQLRVHM---LALGHPILGDRF 180

Query: 526 YGLQD-----KRLFLHAEQLSFAHPYTKQPMTFQVDADF 559
           Y   +      RL LHAE L+  HP     MTF+  ADF
Sbjct: 181 YASPEARAMAPRLLLHAEMLTITHPAYGNSMTFKAPADF 219