Pairwise Alignments

Query, 559 a.a., RluA family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 261 a.a., tRNA pseudouridine(65) synthase TruC from Dickeya dianthicola ME23

 Score = 94.7 bits (234), Expect = 4e-24
 Identities = 79/234 (33%), Positives = 109/234 (46%), Gaps = 42/234 (17%)

Query: 356 ITIVYQDDAIVVVNKPAEFLSVPGVHVHDSVLTRLKAQFTQ-------AEGVFALHRLDM 408
           + IVYQD+ ++ VNKPA +L      VH S L R +             + VF +HRLD 
Sbjct: 2   LEIVYQDEHLIAVNKPAGWL------VHRSWLDRNEKVVVMQTVRDQIGQHVFTVHRLDR 55

Query: 409 STSGLLVFALTRRANKQLQKQFISRAVQKRYVALIEGKLSETQGEIQLPLCGDLDDRPRQ 468
            TSG+L+ AL+    + L +QF    ++K Y A++ G + E  G I   L  +L DR   
Sbjct: 56  PTSGVLLMALSPEVARLLAQQFEQHQMEKTYHAVVRGYVME-DGVIDYALTEEL-DRIAD 113

Query: 469 KVC--WQQGKPALTHWET-------VQVEQNRTRVY----LYPHTGRTHQLRVHCAHHLG 515
           K     +  +PA++H+         V + +  T  Y    L P TGR HQLR H AH   
Sbjct: 114 KYANPDKAPQPAVSHYRVLARAELPVAIGRYDTSRYSLLQLNPKTGRKHQLRRHMAH--- 170

Query: 516 LNAPIVGDDLYG-----------LQDKRLFLHAEQLSFAHPYTKQPMTFQVDAD 558
           L  PI+GD  +G               RL LHA  LS  HP T +P+      D
Sbjct: 171 LRHPIIGDTSHGDLRQNRGMAAHFDCARLMLHASSLSLIHPVTNEPLVISARWD 224