Pairwise Alignments

Query, 559 a.a., RluA family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 222 a.a., ribosomal large subunit pseudouridine synthase A from Agrobacterium fabrum C58

 Score =  144 bits (364), Expect = 3e-39
 Identities = 87/224 (38%), Positives = 136/224 (60%), Gaps = 16/224 (7%)

Query: 344 NPLLSNPAQGQDITIVYQDDAIVVVNKPAEFLSVPGVH--VHDSVLTRLKAQFTQAEGVF 401
           NP+  NP     +TIV++DD ++V++KP+  LSVPG    + DS++TR++ QF +A    
Sbjct: 7   NPIY-NPPLDPWLTIVHRDDDLLVLDKPSGLLSVPGRDPALSDSLMTRVQKQFPKA---L 62

Query: 402 ALHRLDMSTSGLLVFALTRRANKQLQKQFISRAVQKRYVALIEGKLSETQGEIQLPLCGD 461
            ++RLD  TSG+++ +L R+A+  +  QF  R  +K YVA++ G ++  +GE+ LPL  D
Sbjct: 63  MINRLDKDTSGIVLMSLNRKAHAAIAAQFEKRETRKSYVAIVWGTVAGEEGEVDLPLAID 122

Query: 462 LDDRPRQKVCWQQGKPALTHWETVQ-VEQNRTRVYLYPHTGRTHQLRVHCAHHLGLNAPI 520
            D++PR +V  + GKPA + W  ++ +    TR+ L P TGRTHQLRVH      L  PI
Sbjct: 123 PDNKPRHRVDHENGKPAQSLWRVLERLPLPATRLALTPLTGRTHQLRVHMK---ALGHPI 179

Query: 521 VGDDLYGLQD-----KRLFLHAEQLSFAHPYTKQPMTFQVDADF 559
           +GD+ Y   +      RL LHA+++ F HP   + +T+ V   F
Sbjct: 180 LGDEFYAEGEALTAAPRLMLHAQEVGFRHP-DGRDVTYTVPCPF 222