Pairwise Alignments

Query, 559 a.a., RluA family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 221 a.a., Dual-specificity RNA pseudouridine synthase RluA from Acinetobacter radioresistens SK82

 Score =  151 bits (382), Expect = 2e-41
 Identities = 94/215 (43%), Positives = 133/215 (61%), Gaps = 17/215 (7%)

Query: 343 DNPLLSNPAQGQDITIVYQDDAIVVVNKPAEFLSVPG--VHVHDSVLTRLKAQFTQAEGV 400
           + P +  P Q Q ++I+Y+DD +++++KPA  LSVPG      DS   RL  ++  A+  
Sbjct: 4   NQPFIYAPPQ-QPLSIIYEDDDLIIIDKPAGLLSVPGRLPEHQDSAYLRLLEKYPHAK-- 60

Query: 401 FALHRLDMSTSGLLVFALTRRANKQLQKQFISRAVQKRYVALIEGKLSETQGEIQLPLCG 460
              HRLDM+TSG+L+FA  R A   + K F +R V KRYVALI+G+L+E QG I +PL  
Sbjct: 61  -ITHRLDMATSGILMFAKHRDAEVAISKMFQARTVTKRYVALIQGQLNE-QGSIDVPLIT 118

Query: 461 DLDDRPRQKVCWQQGKPALTHWETVQV--EQNRTRVYLYPHTGRTHQLRVHCAHHLGLNA 518
           D ++RPRQ V ++ GK A T ++ +Q   E + TRV L P TGR+HQLRVH  +   +  
Sbjct: 119 DWENRPRQIVHFELGKSAKTLFQVLQYHEEHDMTRVLLTPITGRSHQLRVHMQY---IGH 175

Query: 519 PIVGDDLY-----GLQDKRLFLHAEQLSFAHPYTK 548
           PI+GD LY     G   +R+ LHA  L+F  P +K
Sbjct: 176 PIMGDKLYHPEPGGFYLRRMALHASYLAFQQPLSK 210