Pairwise Alignments

Query, 518 a.a., EAL domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 516 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  159 bits (401), Expect = 3e-43
 Identities = 96/273 (35%), Positives = 149/273 (54%), Gaps = 5/273 (1%)

Query: 227 TLLTLARQQVFTWGIPLAVLLGVFLSASYLILRNYRNSIEGLIEKGIRDEEFIPYYQPIV 286
           TL     Q +F + IPL++ L V +   Y      R S+   I +GI   EF  +YQP+ 
Sbjct: 212 TLSAYWLQNLFIF-IPLSLCLSVGMMLFYRRWYLKRLSLAREIARGITHNEFTVHYQPVF 270

Query: 287 DSRTQEVVGYEVLLRW-QKGHQLVPPSLFISAAEDSGLVVKITNQLIQQVHRDLAQ--IP 343
           + +     G E L+RW Q   + + P +FI+AAE+ G+++ ++  L + +  D+    +P
Sbjct: 271 NVKHGSCGGVEALMRWPQPDGRFITPDIFITAAENEGMIIPLSRHLFELIAHDVINWTVP 330

Query: 344 APRWVSINVVADHLEQHHLTHLLEELHWPYSE-RLKFELTERVPIKAMTQAQEEVFYLLK 402
              ++S+N+   HL        +E L        L  ELTER  I   +Q  E++  L +
Sbjct: 331 DDFYISVNISPAHLMDDGFIQDIEALRTRLGTITLMLELTERSLIVEPSQVAEKLSTLRE 390

Query: 403 KGYQFKIDDFGTGYGGFAYLQNLQISSIKIDKMFVDTINTHDVKISVLDSIIASAQGGNI 462
           KG    IDDFGTGY   +YLQ L + S+KID+ F+DTI+T    + VLD+II  +Q   +
Sbjct: 391 KGVLIAIDDFGTGYCSLSYLQQLPVDSLKIDRTFIDTIDTSSDDVPVLDTIITLSQRLGL 450

Query: 463 EVIAEGVEHQYQVDYLAERNVFWIQGYFYAKPM 495
            V+AEGV  Q+Q+ Y+    V ++QG+ YA+PM
Sbjct: 451 NVVAEGVSTQHQLRYILSHGVGFVQGFLYARPM 483