Pairwise Alignments

Query, 518 a.a., EAL domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 362 a.a., c-di-GMP-specific phosphodiesterase from Escherichia coli BL21

 Score =  130 bits (328), Expect = 6e-35
 Identities = 81/236 (34%), Positives = 127/236 (53%), Gaps = 8/236 (3%)

Query: 269 IEKGIRDEEFIPYYQPIVDSRTQEVVGYEVLLRWQKGHQ-LVPPSLFISAAEDSGLVVKI 327
           I   + + EF P+ QP+  ++T  + G EVL+RW+     ++PP  FI  AE SGL+V +
Sbjct: 113 ISLALENHEFKPWIQPVFCAQTGVLTGCEVLVRWEHPQTGIIPPDQFIPLAESSGLIVIM 172

Query: 328 TNQLIQQVHRDLAQI----PAPRWVSINVVAD-HLEQHHLTHLLEELHWPYSERLKF--E 380
           T QL++Q    L  +    P    + INV A   L        L  ++   ++++K   E
Sbjct: 173 TRQLMKQTADILMPVKHLLPDNFHIGINVSAGCFLAAGFEKECLNLVNKLGNDKIKLVLE 232

Query: 381 LTERVPIKAMTQAQEEVFYLLKKGYQFKIDDFGTGYGGFAYLQNLQISSIKIDKMFVDTI 440
           LTER PI    +A+     L +    F +DDFGTGY  + YLQ   +  IKIDK FV   
Sbjct: 233 LTERNPIPVTPEARAIFDSLHQHNITFALDDFGTGYATYRYLQAFPVDFIKIDKSFVQMA 292

Query: 441 NTHDVKISVLDSIIASAQGGNIEVIAEGVEHQYQVDYLAERNVFWIQGYFYAKPMP 496
           +  ++   ++D+I+  A+   + ++AEGVE Q Q D +  + V ++QGY Y+ P+P
Sbjct: 293 SVDEISGHIVDNIVELARKPGLSIVAEGVETQEQADLMIGKGVHFLQGYLYSPPVP 348