Pairwise Alignments

Query, 297 a.a., EamA/RhaT family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., multidrug transporter from Pseudomonas simiae WCS417

 Score = 81.3 bits (199), Expect = 3e-20
 Identities = 67/281 (23%), Positives = 124/281 (44%), Gaps = 10/281 (3%)

Query: 3   LVNLLQLLCLAAIWGGSFLFMRIAAHSFGPAYLIEARVGFA-ALSLFLVAQLLRRS---L 58
           L+  +  L +   WG ++L ++IA  S  P  L  A + F  A  LFL   ++RR     
Sbjct: 21  LITSVMFLIVCLSWGTTWLGIKIAVESVPP--LTSAGLRFLIAFPLFLCFAMVRREPILF 78

Query: 59  PIRQHWPHFLILGLINTAVPFLLFAYAALTLNVSTLSILNSTAPIWGAVIGFLWHGTPLS 118
           P    W  F+ + L   +VP+ L  Y  + ++    ++L S  P++  +   L+    + 
Sbjct: 79  PRESRW-FFVFVTLSYFSVPYYLLNYGEMHVSSGLTALLFSCMPVFILIFSALFLRERIY 137

Query: 119 RKAVAGLLLGVSGVAVIVGWDMVAIGHHAALPMVCAALAAASYGLATNYTKQ---APQLS 175
              V G+ +G   + +I+    + + H     ++    AA  + L    TKQ   A  + 
Sbjct: 138 LSQVVGIGIGFGSLYMIIKSQGLHLDHAEFFGVLAILTAAIMHALCYVITKQKGSAISVI 197

Query: 176 AFENAHGSMWAACLWVAPLMWFVPLRETPSSLEWGAVILLGVICTGLAYLIYFRLVKAIG 235
            +      +    L+VA L +  P  E  +   WGA+  LG++ +   +++YF L+K + 
Sbjct: 198 TYNTLPIGIAGLMLFVAGLWFETPTFEAITLRSWGALFYLGLVASVGGFIVYFMLLKRLS 257

Query: 236 AASTLSVTFLIPVFGILWGYWILDEPIGLNTLFGTLLVLAG 276
                 V  + PVF ++ G W     I  + +  + ++LAG
Sbjct: 258 PIILSFVFIIFPVFAVIIGAWYEGVSISRDLMLYSAILLAG 298



 Score = 31.2 bits (69), Expect = 3e-05
 Identities = 22/99 (22%), Positives = 44/99 (44%), Gaps = 5/99 (5%)

Query: 40  VGFAALSLFLVAQLLR----RSLPIRQHWPHFLILGLINTAVPFLLFAYAALTLNVSTLS 95
           +G A L LF+           ++ +R  W     LGL+ +   F+++      L+   LS
Sbjct: 204 IGIAGLMLFVAGLWFETPTFEAITLRS-WGALFYLGLVASVGGFIVYFMLLKRLSPIILS 262

Query: 96  ILNSTAPIWGAVIGFLWHGTPLSRKAVAGLLLGVSGVAV 134
            +    P++  +IG  + G  +SR  +    + ++G A+
Sbjct: 263 FVFIIFPVFAVIIGAWYEGVSISRDLMLYSAILLAGFAI 301