Pairwise Alignments

Query, 297 a.a., EamA/RhaT family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., multidrug DMT transporter permease from Pseudomonas simiae WCS417

 Score =  172 bits (435), Expect = 1e-47
 Identities = 102/288 (35%), Positives = 157/288 (54%), Gaps = 8/288 (2%)

Query: 1   MSLVNLLQLLCLAAIWGGSFLFMRIAAHSFGPAYLIEARVGFAALSLFLVAQLLRRSLPI 60
           M  V+ L LL LAAIWG SFLFMRI A   G       RV  AA  L ++  ++R S   
Sbjct: 1   MRPVDTLYLLGLAAIWGASFLFMRIIAPEIGTVPTAFFRVSIAAAGLLVILAMMRVSWDF 60

Query: 61  RQHWPHFLILGLINTAVPFLLFAYAALTLNVSTLSILNSTAPIWGAVIGFLWHGTPLSRK 120
           +  +   L+LG+IN+ +P  +++ AA  L     +I N+T P+ G +IG L+    L+  
Sbjct: 61  QGKFRTVLLLGVINSGIPATMYSVAAQALPAGYSAIFNATTPLMGVLIGGLFFSERLTPS 120

Query: 121 AVAGLLLGVSGVAVIVGWDMVAIGHHAALPMVCAALAAASYG----LATNYTKQAPQLSA 176
            +AG+ LG+ GV V+     VA         +   LA   YG    LA  +  Q   L +
Sbjct: 121 KIAGVCLGLFGVGVLTRAGPVAFDLELLTGALACLLATTCYGFAGFLARRWLDQRGGLDS 180

Query: 177 FENAHGSMWAACLWVAPLMWFVPLRETPSS----LEWGAVILLGVICTGLAYLIYFRLVK 232
             +A GSM  A L++ P   +  + + P+S      WG+++ LG++CT  AY++YFRL+ 
Sbjct: 181 RLSALGSMLGATLFLLPFFAYSAISQPPASWGGWQVWGSLLGLGLVCTAFAYILYFRLLT 240

Query: 233 AIGAASTLSVTFLIPVFGILWGYWILDEPIGLNTLFGTLLVLAGTMLV 280
           +IG   +++VTF+IP FG+LWG  +L EP+ +  ++G +L+     LV
Sbjct: 241 SIGPVKSMTVTFMIPPFGVLWGALLLGEPLSMAHVYGGVLIGGALWLV 288



 Score = 31.2 bits (69), Expect = 3e-05
 Identities = 20/70 (28%), Positives = 34/70 (48%)

Query: 212 VILLGVICTGLAYLIYFRLVKAIGAASTLSVTFLIPVFGILWGYWILDEPIGLNTLFGTL 271
           V+LLGVI +G+   +Y    +A+ A  +       P+ G+L G     E +  + + G  
Sbjct: 67  VLLLGVINSGIPATMYSVAAQALPAGYSAIFNATTPLMGVLIGGLFFSERLTPSKIAGVC 126

Query: 272 LVLAGTMLVT 281
           L L G  ++T
Sbjct: 127 LGLFGVGVLT 136