Pairwise Alignments

Query, 297 a.a., EamA/RhaT family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 222 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Variovorax sp. SCN45

 Score =  109 bits (273), Expect = 5e-29
 Identities = 65/188 (34%), Positives = 103/188 (54%), Gaps = 3/188 (1%)

Query: 76  AVPFLLFAYAALTLNVSTLSILNSTAPIWGAVIGFLWHGTPLSRKAVAGLLLGVSGVAVI 135
           AVPF LFA+ A        +I ++   ++ A++GF + G  +  +    LL G +GV+V+
Sbjct: 1   AVPFALFAWGAERAPAGIGAITSAMTVLFAALVGFAFFGEKIGGRRALALLGGFAGVSVL 60

Query: 136 VGWDMVAIGHHAALPMVCAALAAASYGLATNYTKQ-APQLSAFENAHGSMWAACLWVAPL 194
                   G   A+   CAA  A  YG+  +  ++    L     A  ++ +A L + PL
Sbjct: 61  AAGKAAGAGIGWAVAAGCAA--AFLYGVGLHLVRRHLGGLPPAAVASSTLLSAALLMLPL 118

Query: 195 MWFVPLRETPSSLEWGAVILLGVICTGLAYLIYFRLVKAIGAASTLSVTFLIPVFGILWG 254
                  +  +   WGA ++LG++CTGLAYL+++RLV  IGAA T  VT+LIP+FG+ W 
Sbjct: 119 ALAQWPAQAIAPRAWGAALMLGLLCTGLAYLLFYRLVARIGAARTSLVTYLIPLFGVAWA 178

Query: 255 YWILDEPI 262
           + +LDEP+
Sbjct: 179 WLLLDEPV 186



 Score = 35.4 bits (80), Expect = 1e-06
 Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 16/157 (10%)

Query: 11  CLAA-IWGGSFLFMRIAAHSFGPAYLIEARVGFAALSLF--LVAQLLRRSLPIRQHWPHF 67
           C AA ++G     +R       PA +  + +  AAL +    +AQ   +++  R  W   
Sbjct: 78  CAAAFLYGVGLHLVRRHLGGLPPAAVASSTLLSAALLMLPLALAQWPAQAIAPRA-WGAA 136

Query: 68  LILGLINTAVPFLLFAYAALTLNVSTLSILNSTAPIWGAVIGFLWHGTPLSRK-AVAGLL 126
           L+LGL+ T + +LLF      +  +  S++    P++G    +L    P++   A AG L
Sbjct: 137 LMLGLLCTGLAYLLFYRLVARIGAARTSLVTYLIPLFGVAWAWLLLDEPVTASMAAAGAL 196

Query: 127 LGVSGVAVIVGWDMVAIGHHAALPMVCAALAAASYGL 163
                        ++    H  L +   AL  A++GL
Sbjct: 197 TA-----------LITASDHFGLLLAARALLGANHGL 222