Pairwise Alignments

Query, 297 a.a., EamA/RhaT family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., IS1595 family transposase ISBsp7 from Pseudomonas sp. DMC3

 Score =  173 bits (438), Expect = 5e-48
 Identities = 105/288 (36%), Positives = 159/288 (55%), Gaps = 8/288 (2%)

Query: 1   MSLVNLLQLLCLAAIWGGSFLFMRIAAHSFGPAYLIEARVGFAALSLFLVAQLLRRSLPI 60
           +S V++ ++L LAAIWG SFLFMRI A   G       RV  AA  L ++  L+R S   
Sbjct: 1   VSPVDIFRMLSLAAIWGASFLFMRIIAPVIGTIPTGFFRVSIAAAGLLVILGLMRISWDF 60

Query: 61  RQHWPHFLILGLINTAVPFLLFAYAALTLNVSTLSILNSTAPIWGAVIGFLWHGTPLSRK 120
           +      ++LG+IN+ +P  L++ AA  L     +I N+T P+ G +IG L+    L+  
Sbjct: 61  KGKLKTVMLLGVINSGIPATLYSVAAQVLPAGYSAIFNATTPLMGVLIGGLFFSEKLTAA 120

Query: 121 AVAGLLLGVSGVAVIVGWDMVAIGHHAALPMVCAALAAASYG----LATNYTKQAPQLSA 176
            ++G+ LG+ GV V+     VA      +  V   LA   YG    LA  +  QA  L +
Sbjct: 121 KLSGVFLGLFGVGVLTRAGPVAFDLQLLMGAVACLLATTCYGFAGFLARRWLDQAGGLDS 180

Query: 177 FENAHGSMWAACLWVAPLMWFVPLRETPSSLE----WGAVILLGVICTGLAYLIYFRLVK 232
             +A GSM  A L++ PL  +  +   P S      W +++ LG+ CT  AY+IYFRL+ 
Sbjct: 181 RLSALGSMLGATLFLLPLFAYSTITAPPVSWGGWQVWLSLLGLGLGCTAFAYIIYFRLLS 240

Query: 233 AIGAASTLSVTFLIPVFGILWGYWILDEPIGLNTLFGTLLVLAGTMLV 280
           +IG   +++VTF+IP FG+LWG  +LDEP+ +  ++G +L+ A   LV
Sbjct: 241 SIGPVKSMTVTFMIPPFGVLWGALLLDEPLSMAHIYGGVLIAAALWLV 288



 Score = 30.8 bits (68), Expect = 4e-05
 Identities = 20/70 (28%), Positives = 32/70 (45%)

Query: 212 VILLGVICTGLAYLIYFRLVKAIGAASTLSVTFLIPVFGILWGYWILDEPIGLNTLFGTL 271
           V+LLGVI +G+   +Y    + + A  +       P+ G+L G     E +    L G  
Sbjct: 67  VMLLGVINSGIPATLYSVAAQVLPAGYSAIFNATTPLMGVLIGGLFFSEKLTAAKLSGVF 126

Query: 272 LVLAGTMLVT 281
           L L G  ++T
Sbjct: 127 LGLFGVGVLT 136