Pairwise Alignments

Query, 297 a.a., EamA/RhaT family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., permease from Agrobacterium fabrum C58

 Score =  148 bits (374), Expect = 1e-40
 Identities = 88/279 (31%), Positives = 147/279 (52%), Gaps = 5/279 (1%)

Query: 5   NLLQLLCLAAIWGGSFLFMRIAAHSFGPAYLIEARVGFAALSLFLVAQLLRRSLPIRQHW 64
           +L   + LA  WG SFL +     +FG    +  R    A++L+L+A+  RR L     W
Sbjct: 5   DLAAYIFLAITWGVSFLLLLHVVAAFGWIGAVTLRSLITAVALYLIARAARRKLAFSASW 64

Query: 65  PHFLILGLINTAVPFLLFAYAALTLNVSTLSILNSTAPIWGAVIGFLWHGTPLSRKAVAG 124
             F I+G    A   +  +YA   +  +  +IL +T P++  +I  +W    L+R+ +AG
Sbjct: 65  RAFAIVGATTVAGQLIGLSYATPQIGTAMAAILVATIPLFSMLISQMWGLERLTRQGIAG 124

Query: 125 LLLGVSGVAVIVGWDMVAI--GHHAALPMVCAALAAASYGLATNYTK-QAPQLSAFENAH 181
           L++G +G+ ++VG+  V +  G         AA   A+YG  +N+       + ++E   
Sbjct: 125 LVIGFAGIVLLVGFPAVPVTSGFIIGCAAAVAACICAAYG--SNFASLHLKGVGSWEITI 182

Query: 182 GSMWAACLWVAPLMWFVPLRETPSSLEWGAVILLGVICTGLAYLIYFRLVKAIGAASTLS 241
           GS     L   PL++ VPL  TP  +++G +++  V+ +GL Y+ YF+LV +IGA   +S
Sbjct: 183 GSFLTGGLMTLPLLFAVPLPGTPDLVDYGYLLIQAVVMSGLTYITYFKLVSSIGATKAIS 242

Query: 242 VTFLIPVFGILWGYWILDEPIGLNTLFGTLLVLAGTMLV 280
           V F + V  +L G  +LDEP+ L  LFG  +++ G  LV
Sbjct: 243 VEFAVTVVAVLVGALVLDEPLSLPQLFGAGIIIFGCALV 281