Pairwise Alignments

Query, 403 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., Multidrug resistance transporter, Bcr/CflA family from Variovorax sp. SCN45

 Score =  138 bits (347), Expect = 3e-37
 Identities = 99/343 (28%), Positives = 162/343 (47%), Gaps = 6/343 (1%)

Query: 19  MIIATGQVGVSIYLPSLPLISRDLQVDQASAQMLVTLFLLGFGGSQLFYGALSDAVGRRP 78
           ++   G   + +YLP+LP I   L  D  + Q  +  F +  G  QL  G LSD  GRR 
Sbjct: 17  LLTTIGPFAIDMYLPALPAIGHALGADPHAMQASLMAFFIAVGAGQLVAGPLSDMFGRRR 76

Query: 79  TFLLGQGIYLLGTVLCVMMSDHFQALEFGRLLQGLGAGSASVLGRSVLRDSYDGFHLTKA 138
             + G  +++L ++ C +  D    +   R LQGLGA +  V  R+V+RD Y G    + 
Sbjct: 77  PMVAGLVLFMLASIGCALAPDVGVLIAL-RFLQGLGACACMVTPRAVVRDLYTGPEAARM 135

Query: 139 LSYLSITASIMPIIAPVLGGWLAYHLSWQSVFIFVLLYIGAIFTLGLMILPETLPYPKR- 197
           +S L +  S+ PI+AP++G ++A  + W++VF  V     A   + +  LPET P   R 
Sbjct: 136 MSLLLMVYSVSPILAPLVGSFVAESVGWRAVFGVVAALGLAGLAMLMAFLPETRPAAARL 195

Query: 198 RVQWRGIVINYAKLLTNQQVTSSASYNWLSYLASLVTLSILPFLLQKQLGMTAADYGSTL 257
              +R  +  Y  LL +++  + A     +  A  V ++  PF++    G++   Y    
Sbjct: 196 SSNFRSAMAGYGLLLRDRRFMALAFMASFTVSAFFVYVANSPFVMSAHYGVSPRQYALLF 255

Query: 258 IIPSSGLLLGSVLVNMLTSRFSVRQLLGCAISLMVFA-GLWLLLTEFSVFNLIWAFTWLS 316
            + +  LL  S     L +RF +R++L  A+ +   + GL L+LT   +  L      L 
Sbjct: 256 ALNAVSLLALSQANGWLVTRFGIRRVLRTAVMVQAGSIGLLLVLTLAGIDRLAVMVVLLM 315

Query: 317 IAQGIS---FPLATTLLLSPHKSQAGAVSALSGSIQMGIAGLL 356
           I  G++    P    L +  H S AG  SAL G++      L+
Sbjct: 316 IGYGVNGLIVPATFVLAMEGHASLAGTASALIGTMNFAGGALM 358