Pairwise Alignments

Query, 403 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 411 a.a., Multidrug resistance transporter, Bcr/CflA family from Variovorax sp. SCN45

 Score =  134 bits (338), Expect = 4e-36
 Identities = 92/366 (25%), Positives = 175/366 (47%), Gaps = 9/366 (2%)

Query: 1   MNAQTSTRFRRTPMLLAMMIIATGQVG---VSIYLPSLPLISRDLQVDQASAQMLVTLFL 57
           MN      ++     LA+++   G +G   +  Y+P+   I++ +    A  Q  ++ +L
Sbjct: 1   MNPDADKLWQAPRWALAVLLAVLGMLGPFSIDTYIPAFSGIAQSIGATPAEMQQTLSAYL 60

Query: 58  LGFGGSQLFYGALSDAVGRRPTFLLGQGIYLLGTVLCVMMSDHFQALEFGRLLQGLGAGS 117
            GF    LF+GALSD+ GRRP  L G  ++ L ++ C +  +  Q + F R LQGL  G+
Sbjct: 61  FGFAFMNLFHGALSDSFGRRPVVLWGLAVFTLASLGCALSQNITQLVLF-RGLQGLSTGA 119

Query: 118 ASVLGRSVLRDSYDGFHLTKALSYLSITASIMPIIAPVLGGWLAYHLSWQSVFIFVLLYI 177
             V+ R+V+RD +      + +S ++I   + P IAP++GG+L  H  W +VF F++   
Sbjct: 120 GIVVSRAVIRDMFPPAEAQRVMSQVTIYFGVAPAIAPIVGGFLFVHAGWHAVFWFLVAVG 179

Query: 178 GAIFTLGLMILPETLPYPKRR-VQWRGIVINYAKLLTNQQVTSSASYNWLSYLASLVTLS 236
             +FT    +LPETL    R+  Q R ++  Y  L ++ +    A  + + +    + + 
Sbjct: 180 VVLFTANYKLLPETLHKDHRQPFQVRHLMRGYWDLCSDPRFLLLAFASGVPFNGMFLYVL 239

Query: 237 ILPFLLQKQLGMTAADYGSTLIIPSSGLLLGSVLVNMLTSRFS-VRQLLGCAISLMVFAG 295
             P  L   L +    +    ++   G++LG+     +  + +  RQ+    + +++ + 
Sbjct: 240 AAPAFLGDHLALQPQQFFWFFLLTIGGIMLGARASGRMAGKVAPKRQIRDGFLIMLITSV 299

Query: 296 LWLLLTEFSVFNLIWAFTWLSI---AQGISFPLATTLLLSPHKSQAGAVSALSGSIQMGI 352
           + ++   F   ++ WA   L++      +  P+ T L+L  H  + G  S+L   I    
Sbjct: 300 VNVVANTFFQAHVAWALWPLAVFAFGWALMVPVVTLLVLDLHPERRGMASSLQAVIGSTA 359

Query: 353 AGLLGG 358
            G++ G
Sbjct: 360 NGIVAG 365