Pairwise Alignments

Query, 403 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 411 a.a., multidrug effflux MFS transporter from Variovorax sp. OAS795

 Score =  134 bits (338), Expect = 4e-36
 Identities = 101/406 (24%), Positives = 186/406 (45%), Gaps = 18/406 (4%)

Query: 1   MNAQTSTRFRRTPMLLAMMIIATGQVG---VSIYLPSLPLISRDLQVDQASAQMLVTLFL 57
           MN   +  ++     LA+++   G +G   +  Y+P+   I+R +    A  Q  ++ +L
Sbjct: 1   MNPDAAKLWQAPRWALAVLLAVLGMLGPFSIDTYIPAFSGIARSIGATPAEMQQTLSAYL 60

Query: 58  LGFGGSQLFYGALSDAVGRRPTFLLGQGIYLLGTVLCVMMSDHFQALEFGRLLQGLGAGS 117
            GF    LF+GALSD+ GRRP  L G  ++ L ++ C +  +  Q + F R LQGL  G+
Sbjct: 61  FGFAFMNLFHGALSDSFGRRPVVLWGLAVFTLASLGCALSQNIAQLVLF-RGLQGLSTGA 119

Query: 118 ASVLGRSVLRDSYDGFHLTKALSYLSITASIMPIIAPVLGGWLAYHLSWQSVFIFVLLYI 177
             V+ R+V+RD +      + +S ++I   + P IAP++GG+L  H  W ++F F++   
Sbjct: 120 GIVVSRAVIRDMFPPADAQRVMSQVTIYFGVAPAIAPIVGGFLFVHAGWHAIFWFLVAVG 179

Query: 178 GAIFTLGLMILPETLPYPKRR-VQWRGIVINYAKLLTNQQVTSSASYNWLSYLASLVTLS 236
             +F     +LPETL   +R+  Q R ++  Y  L ++ +    A  + + +    + + 
Sbjct: 180 VILFVANYKLLPETLHQSQRQPFQVRHLMRGYWDLCSDPRFLLLAFASGVPFNGMFLYVL 239

Query: 237 ILPFLLQKQLGMTAADYGSTLIIPSSGLLLGSVLVNMLTSRFSVRQLLGCAISLMVFAGL 296
             P  L   L +    +    ++   G++ G+     +  + + ++ +     +M+   L
Sbjct: 240 AAPAFLGDHLALAPTQFFWFFLLTIGGIMSGAWASGRMAGKVAPKRQIRDGFLIMLVTSL 299

Query: 297 ------WLLLTEFSVFNLIWAFTWLSIAQGISFPLATTLLLSPHKSQAGAVSALSGSIQM 350
                 W L T  +V+ L W     +    +  P+ T L+L  H  + G  S+L   I  
Sbjct: 300 VNVVANW-LFTAHAVWAL-WPLAVFAFGWALMVPVVTLLVLDLHPERRGMASSLQAVIGS 357

Query: 351 GIAGLLGGYLVEHWVTSQNAMGVFYILVGITMLSV-LIATKKAHSQ 395
              G++ G +    + S  A+     L    ML + L+A    H Q
Sbjct: 358 TANGVVAGVVAPLVMHSTLALA----LTSTLMLGIGLVAWVWLHGQ 399