Pairwise Alignments

Query, 403 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  155 bits (391), Expect = 3e-42
 Identities = 104/390 (26%), Positives = 195/390 (50%), Gaps = 11/390 (2%)

Query: 19  MIIATGQVGVSIYLPSLPLISRDLQVDQASAQMLVTLFLLGFGGSQLFYGALSDAVGRRP 78
           ++ A GQ   ++Y+PS+  ++++  V  A+ Q ++  +L+ +G SQ  YG LSD +GR+P
Sbjct: 29  ILAAVGQATQTMYVPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQFVYGTLSDRIGRKP 88

Query: 79  TFLLGQGIYLLGTVLCVMMSDHFQALEFGRLLQGLGAGSASVLGRSVLRDSYDGFHLTKA 138
             + G  IY++G+++ +    +   L  G  +QGLG G    + R++ RD ++G  L K 
Sbjct: 89  IIIAGLAIYIIGSLIALFAHQYSWFL-IGSFVQGLGIGCGGAMSRTLSRDCFEGAELHKV 147

Query: 139 LSYLSITASIMPIIAPVLGGWLAYHLSWQSVFIFVLLYIGAIFTLGLMILPETLPYPKRR 198
            S +S+     P++APVLGG+L     W+S ++F+ L+  A+    +  + ETLP   R+
Sbjct: 148 NSLISMCLIFSPLVAPVLGGYLTESFGWRSSYLFLSLFAIAVVITMMTSMVETLPATARK 207

Query: 199 VQWRGIVINYAKLLTNQQVTSSASYNWLSYLASLVTLSILPFLLQKQLGMTAADYGSTLI 258
            +   ++ +Y  +L++++          ++    V  +    LL   LG+ A       +
Sbjct: 208 KE--PVLRSYHYVLSDRRFQGYLICLVATFAGLAVFEAAAGVLLGGVLGLPATTVSLLFV 265

Query: 259 IPSSGLLLGSVLVNMLTSRFSVRQLLGCAISLMVFAGLWLLLTEF----SVFNLIWAFTW 314
           +P  G L G+ L N++   +  +  +   +  ++   L ++L       +  +LI   T 
Sbjct: 266 LPIPGYLAGAWLSNVIARHWREKTAMHVGLLAILTGSLVIMLPGLLGMTTALSLIGGATI 325

Query: 315 LSIAQGISFPLATTLLLSPHKSQAGAVSALSGSIQMGIAGLLGGYLVEHWVTSQNAMGVF 374
             +  GI FP ATT  LSP    AG   A+ G +Q   AGL   +      + Q  +G+ 
Sbjct: 326 YFLGAGILFPAATTGALSPFPYHAGTGGAILGGMQNLGAGLATLFAAMFPASDQLPLGII 385

Query: 375 YILVGITMLSVLIATKKAHS-QPSAAQVPM 403
            +L+ +  L  L   K+ ++ QP + ++P+
Sbjct: 386 MLLMSVLALWGL---KRVYTKQPPSDEMPI 412