Pairwise Alignments

Query, 403 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 395 a.a., Multidrug resistance transporter, Bcr/CflA family from Pseudomonas putida KT2440

 Score =  122 bits (306), Expect = 2e-32
 Identities = 98/394 (24%), Positives = 177/394 (44%), Gaps = 10/394 (2%)

Query: 1   MNAQTSTRFRRTPMLLAMMIIATGQVGVSIYLPSLPLISRDLQVDQASAQMLVTLFLLGF 60
           MN    +  R     L +++   G   + + LPS P +S + +VD       V+ F +G 
Sbjct: 1   MNRPAGSLRRHLCSTLLILLCLLGVFPLDVILPSFPALSDEFRVDTKQIAYSVSFFAVGV 60

Query: 61  GGSQLFYGALSDAVGRRPTFLLGQGIYLLGTVLCVMMSDHFQALEFGRLLQGLGAGSASV 120
             +Q+  G LSD +GR+   L G  + ++G + CV  S H++     RL+Q LG GS  V
Sbjct: 61  AMAQIVIGPLSDGIGRKRLLLAGLSVSIVGALGCV-FSTHYETFMAFRLVQALGCGSL-V 118

Query: 121 LGRSVLRDSYDGFHLTKALSYLSITASIMPIIAPVLGGWLAYHLSWQSVFIFVLLYIGAI 180
           LG+++++D Y G         L+  + +   ++P+ G +L     W++ F  V + I AI
Sbjct: 119 LGQALVQDLYSGTQRNAMRILLTSASGLFISLSPLAGAFLQQSFGWEASFT-VFVIIAAI 177

Query: 181 FTLGLMILPETLPYPKRRVQWRGIVINYAKLLTNQQVTSSASYNWLSYLASLVTLSILPF 240
            +L   +L    P    R      + +Y  +L +    + +  + L++      + I P 
Sbjct: 178 VSLLSCVLLHDTPASHDRAP---SMSSYRVMLRDTDYLAHSMLSSLAFACHFSFIVIAPL 234

Query: 241 LLQKQLGMTAADYGSTLIIPSSGLLLGSVLVNMLTSRFSVRQLLGCAISLMVFAGLWLLL 300
           LL  +L +TA  +    I      ++G +    L SR S +  +   + L+  AG+ LL+
Sbjct: 235 LLMGRLELTAYQFSLVFIGYGLAYIVGGMAAAYLNSRVSPQTQIKAGLLLISTAGITLLM 294

Query: 301 TEF----SVFNLIWAFTWLSIAQGISFPLATTLLLSPHKSQAGAVSALSGSIQMGIAGLL 356
            E+    SV   +      +    +  P ATT  L+ +  QAGA ++L+ ++    AGL 
Sbjct: 295 WEWVAGLSVLGALLPMIVCTTGTTLVRPAATTQALARYPRQAGAAASLNTTLLFAGAGLT 354

Query: 357 GGYLVEHWVTSQNAMGVFYILVGITMLSVLIATK 390
              +          +GV +++  +    +L  TK
Sbjct: 355 SSVVAGLESELPAGLGVLFMVASLCGGWLLACTK 388