Pairwise Alignments

Query, 403 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 399 a.a., multidrug effflux MFS transporter from Pectobacterium carotovorum WPP14

 Score =  150 bits (378), Expect = 8e-41
 Identities = 113/368 (30%), Positives = 187/368 (50%), Gaps = 17/368 (4%)

Query: 4   QTSTRFRRTPMLLAMMII----ATGQVGVSIYLPSLPLISRDLQVDQASAQMLVTLFLLG 59
           Q  TR  +T  L  + I+    A   +   IYLP++P++++DLQ    +A++ +T FL+G
Sbjct: 3   QIQTRPEKTSGLFFIAILSALMAFTSLSTDIYLPAMPIMAKDLQ---GNAELTITGFLIG 59

Query: 60  FGGSQLFYGALSDAVGRRPTFLLGQGIYLLGTVLCVMMSDHFQALEFGRLLQGLGAGSAS 119
           F  +QL +G LSD +GRR    +G  ++++G+V C + +D  Q + F R+ Q LGA +  
Sbjct: 60  FCIAQLIWGPLSDHLGRRIPLFIGMVLFIIGSVGCALSTDMPQIV-FWRVFQALGACTGP 118

Query: 120 VLGRSVLRDSYDGFHLTKALSYLSITASIMPIIAPVLGGWLAYHLSWQSVFIFVLLYIGA 179
           +L R+++RD +      + LS L I  +I PI  P+LGG L    SW ++F ++L  IG 
Sbjct: 119 MLARAMIRDLFSRTRAAQMLSTLMIVMAIAPIAGPLLGGQLIKVTSWHAIF-WLLAVIGV 177

Query: 180 IFTLGLMILPETLPYPKR-RVQWRGIVINYAKLLTNQQVTSSASYNWLSYLASLVTLSIL 238
           +  + L  LPETLP  +R +        NY  LLTN             Y+A+   ++  
Sbjct: 178 VMLISLRWLPETLPADRRVKASLPSAFRNYYALLTNANFMCFTLCLTFYYVAAYAFITGS 237

Query: 239 PFLLQKQLGMTAADYGSTLIIPSSGLLLGSVLVNMLTSRFSVRQLLGCAISLMVFAGLWL 298
            F+     G+    YG    +   G++  SV+   L  R+ + +LL  A+ +   A   L
Sbjct: 238 AFVYITYFGIDPQHYGWLFALNIVGVMGMSVVNRRLVQRYPLEKLLKFAVLIAAAASFIL 297

Query: 299 LL-TEFSVFNLIW----AFTWLSIAQGISFPLATTLLLSPHKSQAGAVSALSGSIQMGIA 353
            + T+  +  +I      F + S+  GI    +T   L    + AG+ SAL GS+Q G +
Sbjct: 298 AIGTKLHIGGIILIVVSVFVFFSM-NGIIAATSTAAALDAVPNMAGSASALIGSLQYG-S 355

Query: 354 GLLGGYLV 361
           G++   L+
Sbjct: 356 GIISSLLL 363