Pairwise Alignments

Query, 403 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 396 a.a., MFS family multidrug transport protein, bicyclomycin resistance protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  139 bits (351), Expect = 1e-37
 Identities = 101/360 (28%), Positives = 185/360 (51%), Gaps = 29/360 (8%)

Query: 15  LLAMMIIATGQVGVSIYLPSLPLISRDLQVDQASAQMLVTLFLLGFGGSQLFYGALSDAV 74
           LLAM++     + + +YLP+LP+IS    V   SAQM ++ ++LGF   QL YG ++D++
Sbjct: 17  LLAMLM----PLSIDMYLPALPVISAQFGVPAGSAQMTLSTYILGFALGQLIYGPMADSL 72

Query: 75  GRRPTFLLGQGIYLLGTVLCVMMSDHFQALEFGRLLQGLGAGSASVLGRSVLRDSYDGFH 134
           GR+P  L G  ++    V C +     Q +   R   GL A +ASV+  +++RD Y    
Sbjct: 73  GRKPVILGGTLVFAAAAVACALAQTIDQLIVM-RFFHGLAAAAASVVINALMRDIYPKEE 131

Query: 135 LTKALSYLSITASIMPIIAPVLGGWLAYHLSWQSVFIFVLLYIGAIFTLGLM--ILPETL 192
            ++ +S++ +  +I P++AP++GGW+   LSW   +IF +L I AI    ++  ++ ETL
Sbjct: 132 FSRMMSFVMLVTTIAPLMAPIVGGWVLVWLSWH--YIFWILAIAAILASVMIFALIKETL 189

Query: 193 PYPKRR-VQWRGIVINYAKLLTNQQVTSSASYNWLSYLASLVTLSILPFLLQKQLGMTAA 251
           P  +R+    R  + N+A L  +++V S    +  S+      LS  PF+  +   +   
Sbjct: 190 PVERRQPFHIRTTIGNFAALFRHKRVLSYMLASGFSFAGMFSFLSAGPFVYIEINHVPPQ 249

Query: 252 DYGSTLIIPSSGLLLGSVLVNMLTSRFSVRQLLGCAISLMVFAGLWL--LLTEFSVFNLI 309
           D+G    +     ++   ++ ++ SRF VR++       M  AGLW+   +  + VF+ +
Sbjct: 250 DFGYYFALN----IVFLFVMTIINSRF-VRRV---GALNMFRAGLWIQFAMAVWMVFSAL 301

Query: 310 WAFTWLSIAQGISFPL---------ATTLLLSPHKSQAGAVSALSGSIQMGIAGLLGGYL 360
               + ++  G++  +         A  ++L      AG  S+L+G+ + GI  ++G  L
Sbjct: 302 MGIGFWALVVGVAAFVGCVSMVSSNAMAVILDEFPHMAGTASSLAGTFRFGIGAIVGALL 361