Pairwise Alignments

Query, 403 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 394 a.a., Bcr/CflA family multidrug efflux MFS transporter from Erwinia tracheiphila SCR3

 Score =  145 bits (365), Expect = 3e-39
 Identities = 106/386 (27%), Positives = 190/386 (49%), Gaps = 24/386 (6%)

Query: 15  LLAMMIIATGQVGVSIYLPSLPLISRDLQVDQASAQMLVTLFLLGFGGSQLFYGALSDAV 74
           LLAM++     + + +YLP+LP I+R+  V   S QM + +++LGF   QL YG L+D+ 
Sbjct: 13  LLAMLM----PLSIDMYLPALPEIAREFGVTAGSVQMTLNIYILGFALGQLVYGPLADSF 68

Query: 75  GRRPTFLLGQGIYLLGTVLCVMMSDHFQALEFGRLLQGLGAGSASVLGRSVLRDSYDGFH 134
           GR+P   LG  I+ +    C M     Q +   RLL GL A + SV+  +++RD Y    
Sbjct: 69  GRKPLISLGTLIFSVAAAACAMAQTIDQLIVM-RLLHGLSAAAGSVVSSALMRDCYSKEE 127

Query: 135 LTKALSYLSITASIMPIIAPVLGGWLAYHLSWQSVFIFVLLYIGAIFTLGLMI-LPETLP 193
            ++ +S++ +  +I P++AP++GGWL    SW ++F + L  +  + T+ +   + ETLP
Sbjct: 128 FSRMMSFMMMVTTIAPLLAPIIGGWLLQIWSWHAIF-WTLSMVAVVTTIMVATQIRETLP 186

Query: 194 YPKR-RVQWRGIVINYAKLLTNQQVTSSASYNWLSYLASLVTLSILPFLLQKQLGMTAAD 252
             KR +      +IN+  L+ ++Q  S    + LS+      L+  PF+  +   ++  D
Sbjct: 187 ADKRQKFNLWTTLINFLYLVRHRQAFSYMLASGLSFAGMFSFLNAGPFVYIELNHISPQD 246

Query: 253 YGSTLIIPSSGLLLGSVLVNMLTSRFSVRQLLGCAISLMVFAGLWLLLTEFSVFNLIWAF 312
           +G    +    L L +++ +    RF    +    +S+     LWL++   S  NL    
Sbjct: 247 FGYYFALNVVFLFLMTLVNSRSVRRFGPVIMFRFGLSVQFAMALWLVVV--SALNL---- 300

Query: 313 TWLSIAQGISFPL---------ATTLLLSPHKSQAGAVSALSGSIQMGIAGLLGGYLVEH 363
            +L +  G++  +         A  ++L      AG  S+L+G+++ G+  L G  L   
Sbjct: 301 GFLPLVFGVAMYIGCVAMVSSNAMAVILEEFPHMAGTASSLAGALRFGVGALTGALLSTF 360

Query: 364 WVTSQNAM-GVFYILVGITMLSVLIA 388
             T    M G  +I   +++L  + A
Sbjct: 361 TFTDAWPMVGSIFICASLSVLLFMAA 386