Pairwise Alignments

Query, 403 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 391 a.a., multidrug effflux MFS transporter from Erwinia tracheiphila SCR3

 Score =  142 bits (359), Expect = 1e-38
 Identities = 115/378 (30%), Positives = 184/378 (48%), Gaps = 20/378 (5%)

Query: 12  TPMLLAMMIIATGQVGVSIYLPSLPLISRDLQVDQASAQMLVTLFLLGFGGSQLFYGALS 71
           T +LL ++++A   +GV +YLP+LP I+  L       Q  + LFLL  G  QL  G L 
Sbjct: 5   TLLLLGLVLLAP--LGVDLYLPTLPEIALGLNTPVNKIQTTIPLFLLVIGLGQLLAGPLV 62

Query: 72  DAVGRRPTFLLGQGIYLLGTVLCVMMSDHFQALEFGRLLQGLGAGSASVLGRSVLRDSYD 131
           D +GR+P  L G  +YLLG++L    +D  Q L   RL+QG      +V+  S +RD  D
Sbjct: 63  DKLGRKPVALAGLVLYLLGSILAASAADWPQFL-LARLIQGAAVCCTAVVAFSGVRDRLD 121

Query: 132 GFHLTKALSYLSITASIMPIIAPVLGGWLAYHLSWQSVFIFVLLYIGAIFTLGLMILPET 191
           G    KA  +L+   +I+P +AP+LGG+LA    W++ F F+  Y G I  L +  LPET
Sbjct: 122 GDEAAKAYGFLNGALNIVPALAPMLGGFLADDFGWRAPFWFLAGYGGLIGVLVIAFLPET 181

Query: 192 LPYPKRRVQWRGIVI-NYAKLLTNQQVTSSASYNWLSYLASLVTLSILPFLLQKQLGMTA 250
                  V  +GI    Y  +L   +  + A  N  +    L  +S+ P +L  +  + A
Sbjct: 182 RSADTLAV--KGIPFRQYYAILRQSRFLAFAFANAGAMGMVLTYVSLAPQVLMTEGKLNA 239

Query: 251 ADYGSTLIIPSSGLLLGSVLVNMLTSRF---------SVRQLLGCAISLMVFAGLWLLLT 301
             +   +      ++L SV VN +  +          S+   LG   +L +  G+WLL  
Sbjct: 240 LQFSIAVGANGFWIMLVSVAVNKIIRKLGRPFCLAAGSLAMALG---ALTLMGGVWLLPG 296

Query: 302 EFSVFNLIWAFTWLSIAQGISFPL--ATTLLLSPHKSQAGAVSALSGSIQMGIAGLLGGY 359
           ++     ++ F       G++F +  A++  L P++ QAG  SAL+G IQM      G  
Sbjct: 297 DWQDHWTLYIFPVAISLAGLAFTVGPASSYALEPYQQQAGVASALAGFIQMAGGSSAGLL 356

Query: 360 LVEHWVTSQNAMGVFYIL 377
           L+   +  + A+ +  I+
Sbjct: 357 LMVLPLAEKTALSLMMIM 374