Pairwise Alignments

Query, 403 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 391 a.a., Arabinose efflux permease from Enterobacter asburiae PDN3

 Score =  134 bits (337), Expect = 5e-36
 Identities = 101/373 (27%), Positives = 175/373 (46%), Gaps = 11/373 (2%)

Query: 27  GVSIYLPSLPLISRDLQVDQASAQMLVTLFLLGFGGSQLFYGALSDAVGRRPTFLLGQGI 86
           G+ +YL  LP I+RDL   +A   +  + +L G   S +F G ++D  GR+P  + G  I
Sbjct: 18  GIDMYLVGLPHIARDLGASEAQLHIAFSAYLAGMASSMVFAGKIADKAGRQPVAITGAII 77

Query: 87  YLLGTVLCVMMSDHFQALEFGRLLQGLGAGSASVLGRSVLRDSYDGFHLTKALSYLSITA 146
           + L ++LC         L  GR +QG+GAG   V+  ++LRD+       K LS L+   
Sbjct: 78  FALASLLCSQAQSSTVFLA-GRFIQGIGAGGCYVVAFAILRDTLSAQRRAKVLSMLNGIT 136

Query: 147 SIMPIIAPVLGGWLAYHLSWQSVFIFVLLYIGAIFTLGLMILPETLPYPKRRVQWRGIVI 206
            I+P++APV+G  +     WQS+F  +      +F L + +L ET  +P  +       I
Sbjct: 137 CIIPVLAPVVGYLIMLKFPWQSLFWTMAAMGALVFILSISVLKET--HPGSQNTGHTATI 194

Query: 207 NYAKLLTNQQVTSSASYNWLSYLASLVTLSILPFLLQKQLGMTAADYGSTLIIPSSGLLL 266
           + A+ L N+   S  +   LS    L  +++ P LL + +G    +Y + + + +   + 
Sbjct: 195 HPAEKLLNRFFLSRLAVTTLSVAVILTYVNVSPVLLMETMGFDRGEYSTVMALTAMVSMA 254

Query: 267 GSVLVNMLTSRFSVRQLLGCAISLMVFAGLWLLLTEFSVFNLIWAFTWLSIAQGISFPLA 326
            S       + FS R L+  +  L + A   +L T  S   ++   T +     + F +A
Sbjct: 255 VSFSTPFALNVFSQRALMLTSQVLFLTASA-ILATASSHAVMLAGITLICAGFSVGFGVA 313

Query: 327 TTLLLSPHKSQAGAVSALSGSIQMGIAGLLGGYLVEHWVTSQNAMGVFYILVGITM-LSV 385
            +  L P   +AG  S++     +GIA + G  L   W+ +   +    +L+G+ +  S+
Sbjct: 314 MSQALGPFSLRAGVASSV-----LGIAQVCGSSL-WIWLAAVIGLNALNMLIGVLIGCSI 367

Query: 386 LIATKKAHSQPSA 398
           L  T     QP+A
Sbjct: 368 LCITLLMVIQPAA 380