Pairwise Alignments

Query, 403 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 387 a.a., Bcr/CflA family drug resistance efflux transporter from Escherichia coli ECRC100

 Score =  137 bits (344), Expect = 7e-37
 Identities = 98/383 (25%), Positives = 177/383 (46%), Gaps = 24/383 (6%)

Query: 15  LLAMMIIATGQVGVSIYLPSLPLISRDLQVDQASAQMLVTLFLLGFGGSQLFYGALSDAV 74
           L+  ++   G +   +YLP+LP +S  L       Q+ +T  L+G G  QL +G LSD +
Sbjct: 10  LILGLLAGIGPMCTDLYLPALPEMSEQLAATTTITQLTLTASLIGLGVGQLLFGPLSDKI 69

Query: 75  GRRPTFLLGQGIYLLGTVLCVMMSDHFQALEFGRLLQGLGAGSASVLGRSVLRDSYDGFH 134
           GR+   +L   ++++ ++LC   ++ +  + + R +QG+     SVL RS+ RD Y G  
Sbjct: 70  GRKRPLILSLLLFIVSSILCATTNNIYWLVVW-RFIQGIAGAGGSVLSRSIARDKYQGVT 128

Query: 135 LTKALSYLSITASIMPIIAPVLGGWLAYHLSWQSVFIFVLLYIGAIFTLG-LMILPETLP 193
           LT+  + L     + P+++PVLGG++     W+++F +V+  I  +  LG ++ + ETLP
Sbjct: 129 LTQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLF-WVMAEISTVLLLGCVLFINETLP 187

Query: 194 YPKRRVQWRGIVINYAKLLTNQQVTSSASYNWLSYLASLVTLSIL------PFLLQKQLG 247
             KR           + LLT + V  +  +     + S +   +        F+LQK+ G
Sbjct: 188 ENKR---------GSSLLLTGRSVVQNRRFMRFCLIQSFMLAGLFAYIGSSSFVLQKEFG 238

Query: 248 MTAADYGSTLIIPSSGLLLGSVLVNMLTSRFSVRQLLGCAISLMVFAGLWLLL---TEFS 304
            +   +     +   GL++ S + + L  R +   LL   +   +   L  +L   T+  
Sbjct: 239 FSPMQFSLVFGLNGIGLIIASWIFSRLARRINAMTLLRGGLIAAILCALLTVLCAWTQLP 298

Query: 305 VFNLIWAFTWLSIAQGISFPLATTLLLSPHKSQAGAVSALSGSIQM---GIAGLLGGYLV 361
           +  L+  F  ++   GI        + +    ++G  SAL G       GIA  L G+  
Sbjct: 299 IPALVALFFTIAFCSGIGTVGGAEAMSAVGTQESGTASALMGMSMFVFGGIAAPLSGFGG 358

Query: 362 EHWVTSQNAMGVFYILVGITMLS 384
           E  +    A+ V Y L  +  L+
Sbjct: 359 ETLLKMSLAITVCYTLAFLVALT 381