Pairwise Alignments

Query, 403 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., multidrug effflux MFS transporter from Dickeya dadantii 3937

 Score =  155 bits (392), Expect = 2e-42
 Identities = 117/403 (29%), Positives = 191/403 (47%), Gaps = 22/403 (5%)

Query: 7   TRFRRTPMLLAMMIIATGQVGVSIYLPSLPLISRDLQVDQASAQMLVTLFLLGFGGSQLF 66
           +R R    L+   + A G + + +YLP+LP ++  L    A  Q+ +T  LLG G  QL 
Sbjct: 6   SRSRLEYALILGSLAALGPLCIDLYLPALPQMTSALSASTAVTQLSLTAGLLGLGAGQLI 65

Query: 67  YGALSDAVGRRPTFLLGQGIYLLGTVLCVMMSDHFQALEFGRLLQGLGAGSASVLGRSVL 126
           +G LSD +GRR   LL   ++LL +V C +  D  Q L   RLLQG+     +VL R++ 
Sbjct: 66  FGPLSDKLGRRLPLLLSLTMFLLTSVWCALAQDIGQ-LVVARLLQGIAGAGGAVLSRAIA 124

Query: 127 RDSYDGFHLTKALSYLSITASIMPIIAPVLGGWLAYHLSWQSVFIFVLLYIGAIFTLGLM 186
           RD Y G  LT+  S L +   + PI++PVLGG L     W+ +F  + +  G + T+ ++
Sbjct: 125 RDLYVGHALTRFFSLLMLINGLAPILSPVLGGLLLSITDWRGIFALLAVIAGLLLTMSVL 184

Query: 187 ILPETLPYPKRRVQWRGIVI-NYAKLLTNQQVTSSASYNWLSYLASLVTLSILPFLLQKQ 245
            L ETLP  +R     G ++ +   LL  ++         L        +   PF+LQ+ 
Sbjct: 185 RLNETLPAERRIAGGAGSMLSSLGSLLREREFMGLCLAQGLCGAGMFAYIGASPFVLQEV 244

Query: 246 LGMTAADYGSTLIIPSSGLLLGSVLVNMLTSRFSVRQLLGCAISLMVFAGLWLLLTEFSV 305
            G++   +     +   GL+    L +  + RF  +++L   ++  V + L L +  F  
Sbjct: 245 YGLSPQAFSLCFAVNGIGLIAAGQLASHFSLRFGEQRVLRAGLTTAVISALVLTVAGFLH 304

Query: 306 FNLIWAFTWLSIA---QGISFPLATTLLLSPHKSQAGAVSAL-------SGSIQMGIAGL 355
             LI     L  A    GI  P A++L +    S+AG+ SAL        G++ +   GL
Sbjct: 305 APLIGILIPLFFAIAMIGIVGPCASSLAMQSQGSKAGSASALIGLSMFALGALSVPSTGL 364

Query: 356 LGGYLVEHWVTSQNAMGVFYILVGITMLSVLIATKKAHSQPSA 398
            G         S +A+ +  +++G  +L+ L A +    QP A
Sbjct: 365 TG---------STSALSMALVILGCYLLAAL-AYRMLSPQPLA 397