Pairwise Alignments

Query, 403 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 399 a.a., multidrug effflux MFS transporter from Dickeya dadantii 3937

 Score =  150 bits (379), Expect = 6e-41
 Identities = 118/395 (29%), Positives = 197/395 (49%), Gaps = 18/395 (4%)

Query: 4   QTSTRFRRTPMLLAMMII----ATGQVGVSIYLPSLPLISRDLQVDQASAQMLVTLFLLG 59
           Q   R ++ P L  + I+    A   +   IYLP++P++ +DLQ D    ++ +T FL+G
Sbjct: 3   QPQMRSKKIPELFFIAILSALMAFTSLSTDIYLPAMPIMGKDLQGD---VELTITGFLIG 59

Query: 60  FGGSQLFYGALSDAVGRRPTFLLGQGIYLLGTVLCVMMSDHFQALEFGRLLQGLGAGSAS 119
           F  +QL +G LSD  GRR    +G  ++++G+V C + S     + F R+ Q LGA +  
Sbjct: 60  FCIAQLIWGPLSDHWGRRVPLFIGMALFIVGSVGCAL-STTISQIVFWRIFQALGACTGP 118

Query: 120 VLGRSVLRDSYDGFHLTKALSYLSITASIMPIIAPVLGGWLAYHLSWQSVFIFVLLYIGA 179
           +L R+++RD +      + LS L I  +I PI  P+LGG L    SW S+F ++L  IG 
Sbjct: 119 MLARAMIRDLFSRVRAAQMLSTLIIIMAIAPIAGPLLGGQLINVTSWHSIF-WLLAVIGL 177

Query: 180 IFTLGLMILPETLPYPKR-RVQWRGIVINYAKLLTNQQVTSSASYNWLSYLASLVTLSIL 238
           +  + L  LPETLP  KR +        NY  LLTN             Y+A+   ++  
Sbjct: 178 LMFISLYWLPETLPEDKRVKASLSSAFRNYYALLTNTAFMRFTLCLTSYYVAAYAFITGS 237

Query: 239 PFLLQKQLGMTAADYGSTLIIPSSGLLLGSVLVNMLTSRFSVRQLLGCAISLMVFAGLWL 298
            F+     G+    YG    +   G++  S++   L  R+ + +LL  A+ +   A L+L
Sbjct: 238 AFVYITYFGVAPQHYGWLFALNIVGVVGMSIVNRRLVQRYPLERLLKFAVLIAAVASLFL 297

Query: 299 LL-TEFSVFNLIW----AFTWLSIAQGISFPLATTLLLSPHKSQAGAVSALSGSIQMGIA 353
            + T+ ++  +I      F + S+  GI    +T   L    + AG+ SAL GS+Q G +
Sbjct: 298 AIGTKLNIGGIILIVVAVFIFFSM-NGIIAATSTAAALDAVPNIAGSASALIGSLQYG-S 355

Query: 354 GLLGGYLVEHWVTSQNAMGVFYILVGITMLSVLIA 388
           G++   L+   +       + +I+   T++S +IA
Sbjct: 356 GIISSLLLA-LLGDGTPWTMAWIIALFTVISAVIA 389